Bradyrhizobium sp. BF49: BF49_1505
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Entry
BF49_1505 CDS
T04337
Name
(GenBank) Ornithine decarboxylase EC 41117
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
brad
Bradyrhizobium sp. BF49
Pathway
brad00330
Arginine and proline metabolism
brad00480
Glutathione metabolism
brad01100
Metabolic pathways
brad01110
Biosynthesis of secondary metabolites
brad04148
Efferocytosis
Module
brad_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
brad00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
BF49_1505
09106 Metabolism of other amino acids
00480 Glutathione metabolism
BF49_1505
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
BF49_1505
Enzymes [BR:
brad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
BF49_1505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CUT10425
LinkDB
All DBs
Position
I:1553871..1556228
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AA seq
785 aa
AA seq
DB search
MDYFKRFNFLFAAPVFDADDLEGVRFNQIIEEIQRSGFEVVRARKLEDAEMAVQTDAAIG
CMVVDWGKKGLEGKTSALINLMRRRGLDFPIILLIRRKRFEDLPVEVLDFIDGYVFLSEE
TPTFIAKNLISRLKQYAETLKTPFFGALVDYAEEGNQLWTCPGHNGGVFYNRSPIGRVFV
EHLGESVFRDDLDNSVLDLGDLLTHEGPALKAQKEAAQIFGAEKTYFVLNGTSTSNKVAL
GALVTDGDLVLFDRNNHKAAHHGALMINGGVPVYVPTIRNAWGLIGPMRWDMLDEKTLRE
AIRNHPLVTDKDAWRKERPFRVAVVEQCTYDGTIHSAEMILKRIGHLCEYILFDEAWAGF
MKFHPLYAGRFAMGLANLPPEAPGIIATQSTHKQLASFSQASQIHIKDRHIRGQKRRVEH
RRFNESFMQHASTSPFYPLFASLDVGAQMMKGRSGEVLWDDTIRLGIELRKKIRAMRREF
EEKEQNPDRRWFFEPFVPDRVAIPDVSHAGASHNVAWETLSTDELATNPALWQLSPDSAW
HGFPGLSEGFAMTDPNKLTLLTPGFDRITGGYVDHGIPAPVVAQYLRENRIVPEKNDLNS
LLFLLTPGVEASKAGTLISGLVAFKRLHDDNALLADVIPEFSQRRQARYAGVRLRDLCGE
MHRFFRAADVSALQARQFMPEHMPDIAMSPRDAARYLFRNDVDYLPIEAITGRIATTPFV
VYPPGIATIVPGERLTERAKPMLDYLKMFETCFNTFPGFDVEIQGVYKEIDAQGRIGLYT
YVVTE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggactatttcaagcgcttcaacttcctgttcgccgcacctgtgttcgacgccgacgac
ctcgaaggcgtgcgcttcaaccagatcatcgaggagatccagcgttccggcttcgaggtc
gttcgcgcccgcaagctggaggacgcggagatggcggtgcagaccgatgccgcgatcggc
tgcatggtggtggattggggcaagaagggcctggagggcaagacctcggcgctgatcaat
ttgatgcggcgacgcggcctcgatttcccgatcatcctcctgatccggcgcaagcggttc
gaggatctcccggtcgaggtgctcgacttcatcgacggttatgtcttcctgtccgaggag
acaccgaccttcatcgccaagaacctgatcagccgtctgaagcaatatgcggagacgctg
aagacgccgttcttcggcgcgctggtcgactatgccgaggagggcaaccagctctggacc
tgtccgggccacaatggcggcgtgttctacaaccgcagccccatcggacgggtcttcgtc
gaacatctcggcgagtccgtgttccgcgacgatctcgacaattccgtgctcgacctgggc
gacctcctcacccatgaaggaccggcgttgaaggcacagaaggaagccgcccagatcttt
ggcgcggaaaagacctacttcgtgctcaatggaacctcgacctcgaacaaggttgcgctc
ggcgccctcgtcaccgacggcgatctcgtactgttcgaccgcaacaatcacaaggccgcc
catcatggcgcgctgatgatcaatggcggcgtcccggtctacgtgccgaccatccggaat
gcctggggcctgatcggcccgatgcgctgggatatgctcgacgagaaaaccttgcgcgag
gcaatccgcaatcatcccctggtcacggacaaggacgcctggcgcaaggaacggccgttc
cgcgtcgccgtggtcgagcagtgcacctatgacggcaccatccacagcgccgagatgatc
ttgaagcgcatcggccatctctgcgagtacatcctgttcgacgaggcctgggccggcttc
atgaagttccacccgctctatgcgggccgcttcgccatggggctggcgaaccttcccccc
gaggcacccgggatcatcgcgacgcagtcgacccacaagcagcttgcgagcttctcgcag
gcatcccaaatccacatcaaggatcgtcacatccgcggccagaagcgacgcgtcgagcac
cgccgcttcaatgaaagtttcatgcagcacgcttccacgtcgccattctacccgctgttc
gcctcgctcgacgtcggcgcgcagatgatgaagggccgctccggcgaagtgctgtgggac
gacaccatccggctcggcatcgagctgcgcaagaagatccgcgcgatgcgcagggagttc
gaggagaaggagcagaatccggacaggcgctggttcttcgaacccttcgtccccgatcgc
gtcgccattcccgatgtcagccacgccggcgcttcgcacaacgtcgcctgggaaacactc
tccaccgacgagctcgccaccaatcctgcgctgtggcagctctcccccgacagcgcctgg
catggcttccctggcctgagcgagggcttcgccatgaccgatccgaacaagctgacgctg
ctcacgcccggcttcgatcgcatcaccggcggctatgtcgatcacggcatccccgctccg
gtcgtcgcgcaatatctgcgcgagaaccgcatcgtccccgagaagaacgacctcaactcc
ctgctcttcctgcttactccgggcgtcgaggcaagcaaggcgggcacgctgatctccggt
ctcgtcgccttcaagcggctgcacgacgacaatgcgctgcttgcggacgttatcccggag
ttctcccagcggcggcaggcgcgctatgccggcgtgcggctgcgcgacctctgcggcgag
atgcaccgcttctttcgcgccgccgacgtcagcgcgcttcaggcgcgacagttcatgccc
gagcacatgcctgacatcgcgatgtcgccccgcgatgccgcgcgctacctgttccgcaac
gatgtcgactatctgccgatcgaggcgatcacgggccgtatcgccaccacacccttcgtg
gtctatccccccggcatcgccaccatcgtgcccggcgagcggctgacggaacgggccaag
cccatgctggattatctcaagatgttcgagacctgcttcaacacgttcccgggcttcgac
gtggaaatccagggcgtctacaaggagatcgatgcgcaggggcgcatcgggctctatact
tacgtcgttaccgagtag
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