Bradyrhizobium sp. BF49: BF49_1900
Help
Entry
BF49_1900 CDS
T04337
Name
(GenBank) LDtranspeptidase YcbB
KO
K21470
L,D-transpeptidase YcbB
Organism
brad
Bradyrhizobium sp. BF49
Brite
KEGG Orthology (KO) [BR:
brad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brad01002
]
BF49_1900
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
brad01011
]
BF49_1900
Peptidases and inhibitors [BR:
brad01002
]
Cysteine peptidases
Family C82
BF49_1900
Peptidoglycan biosynthesis and degradation proteins [BR:
brad01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
BF49_1900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
BH3
Motif
Other DBs
NCBI-ProteinID:
CUT10820
LinkDB
All DBs
Position
I:1989093..1990442
Genome browser
AA seq
449 aa
AA seq
DB search
MSKRHAMIIAVGMLASASALAQTETIGQAGPKPATAAGTVPATANPAHAAAPKTAAPASA
STAESRSAAALALTHEPTYDEGSAQRIKDAALSYSDLAVRGGWPAIPADAKFAAGAQGAN
DDLLRKRLVVSGDLFADKASGAFDQDLADAVKRFQARHGLAPTGTMTPRTIAAMNVPVQK
RIRQLEASLQRLENMNFGFGQRYVVVNIPAAFAEAVENDVVVRRYRVIVGKTEKPSPTLT
AQISSVVLNPTWTVPSSIAKTEISAHMRKDPTYLSRMHMEVLDAHDNPIDPNSVDWSGTH
TPNFTVRQHNGTFNALGAVKIDMPNSYSVYMHDTNQRNLFSDDYRFDSHGCSRVDNVRDL
AAWLLKDQPKWSRAAIDAEIASGQHLDVAMVKKVPVAWIYLTAWMTRDQTVQFRNDVYNQ
DEQLLEATAEEAAFFSNAGSHPLTAHMTR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgccatgcgatgatcattgccgtcggcatgcttgcgagtgcctctgcgctt
gctcagaccgagaccattggacaggccgggcccaagccggcgactgcggctggcacggtg
ccggccaccgccaatccggcccacgcagccgcaccgaaaactgccgcgccggcatccgct
tcgacggcagagagccgttcggccgcggcgctcgcgctgacgcatgagccgacctatgac
gaaggatccgcccagcgcatcaaggatgcggcgctcagctattccgatctggcagtgcgc
ggcggctggccggcgatcccggcagacgccaaattcgcggccggcgcccagggcgccaat
gacgatctcctgcgcaagcggctggtcgtctccggcgatcttttcgccgacaaggcgagc
ggcgccttcgaccaggatctcgccgacgccgtgaaacgcttccaggcccgccacggcctc
gcgccgaccggaacgatgacgccgcgcacgatcgcggcgatgaacgtgccggtgcagaag
cgcatccggcagctggaggcttcgctgcagcggctcgagaacatgaatttcggcttcggc
cagcgctatgtcgtcgtcaacatccccgccgccttcgccgaagcggtcgagaacgacgtc
gtggtaaggcgttatcgcgtgatcgtcggcaagaccgaaaagccctcgccgacgctgacg
gcccagatcagcagcgtcgtcctcaatccgacctggacggtgccctcctcgatcgccaag
accgagatctccgcgcatatgcgcaaggatcccacctatctgtcgcgcatgcacatggag
gtgctcgacgcccacgacaatccgatcgacccgaattcggtcgactggtcgggcacgcat
acgccgaatttcaccgtgcgtcagcacaacggcacgttcaacgcgctcggcgcggtcaag
atcgacatgccgaattcctattcggtctacatgcacgacaccaaccagcgcaatctgttc
agcgatgactaccgcttcgattcccatggctgctcgcgcgtcgacaatgtgcgcgatctc
gccgcatggctcttgaaggaccagccgaaatggagccgcgccgcgatcgacgcggaaatc
gccagcggccagcatctcgacgtcgccatggtgaagaaagtgccggtggcctggatctat
ctcacggcgtggatgaccagggaccagaccgtccagttccgcaacgacgtctataaccag
gacgagcagctgctggaggcgacagccgaagaggcggccttcttcagcaatgccggcagc
catccgctgaccgcgcacatgacgagatag
DBGET
integrated database retrieval system