KEGG   Bradyrhizobium sp. BF49: BF49_1900
Entry
BF49_1900         CDS       T04337                                 
Name
(GenBank) LDtranspeptidase YcbB
  KO
K21470  L,D-transpeptidase YcbB
Organism
brad  Bradyrhizobium sp. BF49
Brite
KEGG Orthology (KO) [BR:brad00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:brad01002]
    BF49_1900
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:brad01011]
    BF49_1900
Peptidases and inhibitors [BR:brad01002]
 Cysteine peptidases
  Family C82
   BF49_1900
Peptidoglycan biosynthesis and degradation proteins [BR:brad01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   BF49_1900
SSDB
Motif
Pfam: YkuD PG_binding_1 BH3
Other DBs
NCBI-ProteinID: CUT10820
LinkDB
Position
I:1989093..1990442
AA seq 449 aa
MSKRHAMIIAVGMLASASALAQTETIGQAGPKPATAAGTVPATANPAHAAAPKTAAPASA
STAESRSAAALALTHEPTYDEGSAQRIKDAALSYSDLAVRGGWPAIPADAKFAAGAQGAN
DDLLRKRLVVSGDLFADKASGAFDQDLADAVKRFQARHGLAPTGTMTPRTIAAMNVPVQK
RIRQLEASLQRLENMNFGFGQRYVVVNIPAAFAEAVENDVVVRRYRVIVGKTEKPSPTLT
AQISSVVLNPTWTVPSSIAKTEISAHMRKDPTYLSRMHMEVLDAHDNPIDPNSVDWSGTH
TPNFTVRQHNGTFNALGAVKIDMPNSYSVYMHDTNQRNLFSDDYRFDSHGCSRVDNVRDL
AAWLLKDQPKWSRAAIDAEIASGQHLDVAMVKKVPVAWIYLTAWMTRDQTVQFRNDVYNQ
DEQLLEATAEEAAFFSNAGSHPLTAHMTR
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgtcgaagcgccatgcgatgatcattgccgtcggcatgcttgcgagtgcctctgcgctt
gctcagaccgagaccattggacaggccgggcccaagccggcgactgcggctggcacggtg
ccggccaccgccaatccggcccacgcagccgcaccgaaaactgccgcgccggcatccgct
tcgacggcagagagccgttcggccgcggcgctcgcgctgacgcatgagccgacctatgac
gaaggatccgcccagcgcatcaaggatgcggcgctcagctattccgatctggcagtgcgc
ggcggctggccggcgatcccggcagacgccaaattcgcggccggcgcccagggcgccaat
gacgatctcctgcgcaagcggctggtcgtctccggcgatcttttcgccgacaaggcgagc
ggcgccttcgaccaggatctcgccgacgccgtgaaacgcttccaggcccgccacggcctc
gcgccgaccggaacgatgacgccgcgcacgatcgcggcgatgaacgtgccggtgcagaag
cgcatccggcagctggaggcttcgctgcagcggctcgagaacatgaatttcggcttcggc
cagcgctatgtcgtcgtcaacatccccgccgccttcgccgaagcggtcgagaacgacgtc
gtggtaaggcgttatcgcgtgatcgtcggcaagaccgaaaagccctcgccgacgctgacg
gcccagatcagcagcgtcgtcctcaatccgacctggacggtgccctcctcgatcgccaag
accgagatctccgcgcatatgcgcaaggatcccacctatctgtcgcgcatgcacatggag
gtgctcgacgcccacgacaatccgatcgacccgaattcggtcgactggtcgggcacgcat
acgccgaatttcaccgtgcgtcagcacaacggcacgttcaacgcgctcggcgcggtcaag
atcgacatgccgaattcctattcggtctacatgcacgacaccaaccagcgcaatctgttc
agcgatgactaccgcttcgattcccatggctgctcgcgcgtcgacaatgtgcgcgatctc
gccgcatggctcttgaaggaccagccgaaatggagccgcgccgcgatcgacgcggaaatc
gccagcggccagcatctcgacgtcgccatggtgaagaaagtgccggtggcctggatctat
ctcacggcgtggatgaccagggaccagaccgtccagttccgcaacgacgtctataaccag
gacgagcagctgctggaggcgacagccgaagaggcggccttcttcagcaatgccggcagc
catccgctgaccgcgcacatgacgagatag

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