Bradyrhizobium sp. BF49: BF49_3028
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Entry
BF49_3028 CDS
T04337
Name
(GenBank) tRNA pseudouridine synthase A EC 42170
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
brad
Bradyrhizobium sp. BF49
Brite
KEGG Orthology (KO) [BR:
brad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brad03009
]
BF49_3028
Enzymes [BR:
brad01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
BF49_3028
Ribosome biogenesis [BR:
brad03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BF49_3028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S4
PseudoU_synth_2
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
CUT11948
LinkDB
All DBs
Position
I:complement(3165687..3167870)
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AA seq
727 aa
AA seq
DB search
MPRDSDKDNDSRGRRDRGPAKGGPAKGRSGKPRGPDKKFAKRGFESKGDARPPRGDRDSR
PVRRREEGDAPRRDFSDRPKFNREDRPRQDRPRQDRPREDRPRGEDRGERSFKPRGDRPF
KPREDRPFSDRPSRDGEKRPFKPRGDRPFSDRSSRDGEKRPFKPRGDRPSYGRDDRPPRR
DRDDSRPAGRTGDAKFGDKRAYAPRGDRPERKFDGERKFSRGAPDRNRSERSDSKPWQKR
DAAPRGDRPPRKDFSKGPRKEFGGSDRGQDKPWQKRDDRQGGGDDRPRFSRSRDDRASGD
RPFRERPKFDRPKFDRPRDDRPRFDRGGDRPKFDRPRERSEGRSDWHEHPRSEARSGDRP
RRENEDESRIFEKRPAFGGRGAYRERDRDTERRPRREEETKPKKAGERIAKVLSRAGLAS
RRDAEEMVTQGRVSVNGRVINSPALDITSNDVVTIDGKPLPERERTRLFLYHKPRGLMTT
HDDPEGRPTVFDNLPEGLPRLISIGRLDFNTEGLLLLTNDGGLARTLELPDTGWLRRYRV
RAHGEVTQAQLDELKNGIEIEGVKYGPIDATLERDQGANVWLVFAIREGKNREVRNVCAH
LGLEVNRLIRVSYGPFQLGEVPEGQVEEIKSRVLRDQLGEKIIEKSGAQFDVPQKSASHE
GDDAPREKKPASKRGVINDRKGRRVLVQRTGSEEARERNEAEASGYGPPRRPKRGYHGKR
DLAPKED
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgacagcgacaaagacaacgattcccgcggccggcgtgatcgcggcccggcc
aagggcggcccggccaagggccgctccggcaagccccgcgggcccgacaagaagttcgcc
aagcgcggcttcgagagcaagggcgatgcccgcccgccccgaggcgaccgcgacagccgt
ccggtccgccgccgcgaggagggtgatgcgccccgccgcgacttcagcgaccgcccgaag
ttcaatcgcgaagaccggccgcgccaagaccggccgcgccaagaccggccgcgcgaagac
cggccgcgcggcgaggatcgtggcgagcgcagcttcaagccgcgtggcgatcggcccttc
aagccgcgtgaagaccgtccgttttccgatcgtccgtcgcgcgacggcgagaagcgcccg
ttcaagccccgcggcgaccgcccattttctgatcgctcctcgcgcgatggcgagaagcgg
ccgttcaagccgcgcggtgatcgcccgtcctatgggcgtgatgaccgtccgccgcgcagg
gatcgcgacgattcccgtccggccggccgaaccggtgacgcgaagtttggcgacaagcga
gcttacgcgccgcgtggcgaccgtccggaacgcaagttcgacggcgagcggaagttttcg
cgcggcgcaccggaccgcaatcgcagcgagcgcagcgattcgaaaccatggcagaagcgc
gatgcggctccgcgcggcgaccggccgccgcgcaaggacttcagcaagggtccgcgcaag
gagtttggcggcagcgaccgcggtcaggacaagccctggcagaagcgcgacgatcggcaa
ggcggcggcgacgaccgtccgcgcttttcgcgttcgcgcgacgatcgtgcatcgggcgac
cgtccgttccgcgagcggcccaaattcgatcgtcccaagttcgatcgtccacgcgatgat
cgtccgaggttcgatcgcggcggcgaccgcccgaaattcgatcgtccgcgcgagcgttcc
gagggccgctccgactggcacgagcatccccgcagcgaagcccgttccggcgatcgtcca
cgccgcgaaaacgaggacgagagcaggatcttcgagaagcgtccggccttcggtggccgc
ggcgcttatcgcgagcgcgatcgtgataccgagcggcggccgcgccgcgaggaagagacc
aagccgaagaaggccggcgagcgcatcgccaaggtgctgtcgcgtgcgggcctcgcctcg
cgccgcgatgccgaggagatggtcacgcagggccgcgtcagcgtcaacggtcgtgtgatc
aactcgcctgcgctcgacatcacctcgaacgatgtcgtcaccatcgacggcaagccgttg
ccggagcgcgagcgcacgcggctgttcctctatcacaagccgcgcggtctgatgacgacg
catgacgatcccgaggggcgtccgaccgtgttcgacaatctgcccgaaggcctgccgcgg
ctgatctcgatcggccggctcgacttcaacaccgaaggcctgctgctgctcaccaatgat
ggcgggctcgcgcgcacgctcgagctgccggacaccggctggctgcgccgctaccgtgtc
cgcgcccatggcgaggtcacgcaggcgcagctcgacgagctgaagaacggcatcgagatc
gagggcgtcaaatatggcccgatcgacgccacgctggagcgtgaccagggcgccaatgtc
tggctggtgttcgcgattcgggagggcaagaaccgcgaagtgcgcaacgtctgcgcccat
ctcgggctcgaggtgaaccggctgatccgggtgtcctacggcccgttccagctcggcgag
gtccccgaaggtcaggtcgaggagatcaagtcccgcgtgctgcgcgaccagctcggcgaa
aagatcatcgagaaatcgggcgcgcagttcgacgtgccgcagaaatctgcctcgcatgag
ggggacgacgcgccgcgcgagaagaagccggcgagcaagcgcggcgtgatcaatgaccgc
aagggccgtcgcgtgctggtgcagcgcaccggcagcgaggaagcgcgcgagcgtaacgag
gctgaggcgagcggctacggtccgccgcgccgtcccaagcgcggctatcacggcaagcgc
gatctggcgccgaaggaggactga
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