Bradyrhizobium sp. BF49: BF49_4399
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Entry
BF49_4399 CDS
T04337
Name
(GenBank) FIG01004475 hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
brad
Bradyrhizobium sp. BF49
Brite
KEGG Orthology (KO) [BR:
brad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brad01002
]
BF49_4399
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
brad01011
]
BF49_4399
Peptidases and inhibitors [BR:
brad01002
]
Cysteine peptidases
Family C82
BF49_4399
Peptidoglycan biosynthesis and degradation proteins [BR:
brad01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
BF49_4399
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
CUT13319
LinkDB
All DBs
Position
I:complement(4538352..4540520)
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AA seq
722 aa
AA seq
DB search
MNHRAGFDRVLMTVAATFLTVSASSALAQDQARSSAAELAIEAAIPRPEPANVPPPTASD
IKLDTTATVVDPAKEPAREPLKAESAPAPDKVETKPSDVATTPAAEPTKSETAKTEPAKI
EPAKADTAPPTQAAPAAAAAPASEPVKAASNVPAADQPVADKLKDIIGTKTARYFDRKNE
RAAIEKFYGARDFAPVWTQGGSLTAAAKGVIARLKDAASDGLNPADYPLPDFAAATTPDA
LADAELKLTASMFDYARQAQSGRMHWSQVSGDILYPEHPVDPNEVLAKVATAADASAALE
SYNPPQKLYKELKAKLAELRGQGNGPVIEIADGPTLKYTPARKKQAEIVVEDSRVPQLRV
KLGIAENASDTRYDAAVAEAVRKFQNSAELKATGILDDKTVKAINTPKRDKQIDVVLVNM
ERWRWLPRDLGVPSLGDAYVILNIPDYTLKVMQRGQQVWTTRVVTGKPGTHATPLLTETM
KYITVNPTWNVPPSIVYNEYLPALQQDPTVLQRMGLKLEQNRDGSVHISQPPGEANALGR
IRFNFPNKFLVYQHDTPDKNLFARDERAFSHGCMRVQNPDQYASVLLNIAMPNEKYTPER
IRSMYGKSEIDLKFPTPIPVNITYQTAFVDDGGKLQFRKDVYGRDATMINILKNGRGKDL
ENVVAHSQPSYSRPATTLPNGVLAANNGGSSGPNFFERLFGAPTPPPAPIGRRPQQQRVF
TR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccaccgtgcgggcttcgaccgtgtcttgatgacggtcgcggcgaccttcctcacg
gtatcggccagctcggccctggcgcaggatcaggcgcgcagcagcgctgccgaactcgcg
atcgaagccgcgatcccgcgccccgaacccgcaaacgtcccgcccccgaccgcatccgac
atcaagctcgacaccaccgccacggtggtggaccctgctaaggagcccgccagggaaccc
ttgaaggccgaatccgctcccgcgccagacaaggtcgagaccaagccgtccgacgtcgcc
accacgcccgccgccgagccgacgaagagcgagacggcgaagactgaacccgccaagatc
gaacctgccaaggccgacacggcgcccccaacgcaggccgcgcccgccgccgctgctgct
ccggcctcggagccggtgaaggccgcgagcaacgttcccgcggccgaccagccggtcgcc
gacaagctcaaggatatcattggcaccaagactgcgcgctatttcgaccgtaagaacgaa
cgcgcggcgatcgagaagttctacggtgcacgcgacttcgcgccggtctggacccagggc
ggcagcctgaccgctgcggccaagggcgtgatcgcacggctgaaggacgcggcgtccgac
ggtctcaatcccgccgattacccgctgccggacttcgcagccgccacgacgcccgatgcg
ctcgccgatgccgagctcaagctcaccgccagcatgttcgactatgcgcggcaggcccag
agcggccgcatgcactggtcccaggtcagcggcgacatcctctatcccgagcatccggtc
gatccgaacgaggtgctcgccaaggtcgcgaccgcggcggacgcctccgcggcgctcgag
agctacaatccgccgcaaaagctctacaaggagctgaaggcgaagctcgcggagctccgc
ggccagggcaacggcccggtgatcgagatcgcggatggtccgacgctgaaatacaccccg
gcccgcaagaagcaggctgaaatcgtcgttgaagattcgcgcgtgccgcagctgcgcgtc
aagctcggcatcgccgagaatgccagcgacacccgctatgacgcggcggtcgccgaagcc
gtgcgcaagttccagaacagcgccgagctcaaggcgaccggcatcctcgacgacaagacg
gtcaaggcgatcaacaccccgaagcgcgacaagcagatcgacgtggtgctggtgaacatg
gagcgctggcgctggctgccgcgcgacctgggcgtgccctcgctgggcgacgcctatgtc
atcctcaacattcccgactacacgctgaaggtgatgcagcgcggccagcaggtctggacc
acccgcgttgtgaccggcaagcccggcacgcatgcgaccccgctgctcaccgagacgatg
aagtacatcacggtcaatccgacctggaacgtgccgccgtcgatcgtctacaacgaatat
ctgccggcgcttcagcaggacccgaccgtgctccagcgcatgggcctcaagctcgagcag
aaccgcgatggttcagtgcacatctcgcagccgcccggtgaagccaacgcgctcggccgc
atccgcttcaacttcccgaacaagttcctggtctatcagcacgacacgccggacaagaac
ctgttcgcccgggacgagcgcgccttcagccacggctgcatgcgcgtgcagaacccggat
cagtacgcgtcggttctgctcaacatcgcgatgccaaacgagaagtacacgccggaacgc
atccgcagcatgtacggcaagagcgagatcgacttgaaattcccgaccccgatcccggtc
aacattacctatcagaccgcattcgtggacgatggcggcaagctgcaattccgcaaggac
gtctatggccgcgacgcgaccatgatcaacatcctgaagaacggccgcggcaaggatctc
gagaacgtcgtcgcgcactcccagccgagctattcacgcccggcaacgacgctgccgaac
ggcgtgctggcggccaacaatggcggctcgtccggcccgaatttcttcgagcggctgttc
ggagcgccgaccccgccgccggccccgatcggccgccgtccgcagcagcagcgggtattc
acccgctga
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