Bradyrhizobium sp. BF49: BF49_5106
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Entry
BF49_5106 CDS
T04337
Name
(GenBank) ATPdependent DNA helicase UvrDPcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
brad
Bradyrhizobium sp. BF49
Pathway
brad03420
Nucleotide excision repair
brad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BF49_5106
03430 Mismatch repair
BF49_5106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brad03400
]
BF49_5106
Enzymes [BR:
brad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BF49_5106
DNA repair and recombination proteins [BR:
brad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BF49_5106
MMR (mismatch excision repair)
Other MMR factors
BF49_5106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
CUT14026
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Position
I:complement(5258946..5261582)
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AA seq
878 aa
AA seq
DB search
MTEPRKITSQSVPDHQPAAGGIAARARASVGPQYLSGLNPEQREAVETLDGPVLVLAGAG
TGKTRVLTTRIAHILSQGRARPSEILSVTFTNKAAREMKHRLGQMLGHAVEGMPWLGTFH
SIGGRILRTHAELAQLKSNFTVLDVDDQVRLLKQLLQADNIDDKRWPARMLAGLIDGWKN
RGLTPSQVPSGEAAVFASGKGGKLYASYQERLKILNAADFGDLLLEDIRIFREHPDILRQ
YQQRFKFILVDEYQDTNVAQYLWLRLLSQAPSKPTSPTVIPGRLEEPNPESGDESSARDS
GSAPSAHPGMTAVPVGPTKNICCVGDDDQSIYGWRGAEVDNILRFDHDFPGAKVIRLERN
YRSTGHILAAASHLIAHNEGRLGKTLRTEDHDGEKVTVTGSWDSEEEARGIGEEIEQIQR
QGDKLNEIAILVRASYQMREFEDRFVTLGLPYRVIGGPRFYERAEIRDALAYLRVINSPA
DDLAFERIVNTPKRGLGDATVQMLHDHARKRRIPLFEAARAVVETDELKPKARGSLRDVV
AQFDRWRELIREKDEDEEEDQQQRDAEHQRQVTTHTDLARIVLDESGYTEMWQKDRSADA
AGRLENLKELVRSMEEFQNLQGFLEHISLVMDRDSGVDDDAVSLMTLHSAKGLEFDNVFL
PGWEEGLFPSQRTLDEQGRAGLEEERRLGHVGLTRARRRAKIYFATNRRIHGTWSTTIPS
RFLDELPAANVEITESKGGSAWGGTGGYGASRFDDMEAFGSTYSTPGWQRAQANRNRGGG
GGGNGGRGSFEEQASSFSSQSSSPDFGSFSSRRRGPLTIEGELVAKSTGTTSEFSLSDRV
FHQKFGYGRVTKIDGNKLTIAFDKAGEKKVVDSFVQRA
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagccgcgcaagatcacgtcccagagcgtccccgaccaccagccggcagccggc
ggcattgccgcgcgcgcgcgcgcctcggtgggcccgcaatatctgtccgggctcaatccg
gagcagcgcgaggccgtggagacgctggacggcccggttctggtgctggccggcgccggc
accggtaagacccgcgtgctgaccacgcgcatcgcccatatcctgagccagggccgcgcc
cgcccctccgaaatcctgtcggtgaccttcaccaacaaggccgcgcgcgagatgaagcat
cggctcggccagatgctcggccatgccgtggaaggcatgccgtggctcggcaccttccac
tccatcggcggccgcatcctgcggacccacgccgagctggcgcagctcaagtcgaacttc
accgtgctcgacgtcgacgatcaggtgcggctgttgaagcagctgctgcaagccgacaac
atcgacgacaagcgctggcccgcgcgcatgctcgccgggctgatcgacggctggaagaac
cgcggcctgacgccgtcgcaggtgccgtcgggcgaagccgccgtcttcgccagcggcaag
ggcggcaagctctatgcgagctaccaggagcggctgaagattttgaacgccgccgatttc
ggcgatctgctgctcgaggacatccgtatcttccgcgagcacccggatatcctgcggcag
taccagcagcgcttcaaattcatcctggtcgacgagtatcaagacaccaacgtcgcgcaa
tatctgtggctgcggctgctgtcgcaggcgccgtcgaagccaacctcacccactgtcatt
ccggggcggctcgaagagccgaacccggaatccggagatgagtcctcagctcgagattcc
gggtctgcgccttcggcgcatcccggaatgacggctgtgcctgtaggccccaccaaaaac
atctgttgcgtcggcgacgacgaccagtcgatctatggctggcgcggcgcggaggtcgac
aacatcctgcgcttcgaccatgatttccccggcgccaaggtcatccgcctcgagcgcaac
taccgctcgaccggccacatcctcgccgccgcctcgcacttgatcgcccacaacgagggc
cggctgggaaagacgctgcgcaccgaggaccatgacggcgagaaggtcacggtgacaggc
tcgtgggattcggaagaggaagcccgcggcatcggcgaggagatcgagcagatccagcgc
cagggcgacaagctcaacgagatcgcgatcctggtgcgtgcctcctaccagatgcgcgag
ttcgaggaccgcttcgtcacgctcggcctgccctatcgcgtcatcggcggcccgcgcttc
tacgagcgcgccgagatccgcgatgcgctggcttatctgcgcgtcatcaattcaccggcc
gacgatctcgccttcgagcgcatcgtcaacacgcccaagcgcggacttggcgatgccacc
gtgcagatgctgcacgatcacgcccgcaagcgccgcatccccttgttcgaggccgcgcgc
gcggtggtcgagaccgacgagctgaagccgaaggcgcgcggctccttgcgcgacgtcgtc
gcccagttcgaccgttggcgcgaacttattcgcgagaaggacgaagacgaagaggaagat
cagcagcagcgcgatgctgaacaccaacggcaggtcaccacacataccgatctcgcccgg
atcgtgctagacgagagcggctacaccgagatgtggcagaaggatcgttcggcggacgct
gcgggccggctggagaaccttaaagagctcgtgcgctcgatggaggagttccagaatctg
caagggtttctggaacacatctcgctggtgatggaccgcgacagcggcgtcgacgatgac
gccgtgtcgctgatgacgctgcattcggccaaagggctggaattcgacaacgtgttcctg
cccgggtgggaagaaggcctgtttccgagccagcggacgctggacgaacagggccgcgcc
ggcctggaagaagagcgccggctcggccatgtcggcctgacccgggctcgccgccgcgcc
aagatctattttgccaccaaccgccggatccacggcacctggtcgaccacgatcccgtcg
cgcttcctcgacgaactgcccgcggccaatgtcgagatcacggaatccaagggcggctcc
gcttggggcggcaccggcggctacggcgcctcccgtttcgacgacatggaagcgttcggc
tccacctattcgactccgggctggcagcgcgcccaggccaatcgcaatcgcggcggcggc
gggggcggcaatgggggccgcggcagcttcgaggaacaggcctcgtcgttttcgtcccag
tcctcctcgcccgatttcggcagcttctcctcgcgccgccgcgggcccctgacgatcgag
ggcgagctggtggccaaatccaccggcacgacctcggaattctccctatccgaccgcgtc
ttccaccagaaattcggctacggccgcgtcaccaagatcgacggcaacaagctcaccatc
gcctttgacaaggcgggggaaaagaaggtcgtggacagttttgtgcagcgggcgtga
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