Bradyrhizobium sp. BF49: BF49_6150
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Entry
BF49_6150 CDS
T04337
Name
(GenBank) ATPdependent DNA helicase UvrDPcrA proteobacterial paralog
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
brad
Bradyrhizobium sp. BF49
Pathway
brad03420
Nucleotide excision repair
brad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BF49_6150
03430 Mismatch repair
BF49_6150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brad03400
]
BF49_6150
Enzymes [BR:
brad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BF49_6150
DNA repair and recombination proteins [BR:
brad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BF49_6150
MMR (mismatch excision repair)
Other MMR factors
BF49_6150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
HHH
AAA_12
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CUT15070
LinkDB
All DBs
Position
I:complement(6311184..6313241)
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AA seq
685 aa
AA seq
DB search
MATYLDTLNAEQRRAVEHGVADGATVGAPLLVIAGAGSGKTNTLAHRVAHLIVAGSDPRR
ILLMTFSRRAAAEMAGRVERIARKVLGENNAAIMRDALSWAGTFHGIGARLLREYAERIG
VDPAFTIHDREDSADLMNLVRHERGLSKTESRFPAKGTCLSIYSRCVNAEMEIEKVLGVH
YPWCAGWAAELKGLFAAYVEAKQAQHVLDYDDLLLYWSQMMSDALIAEEIGGRFDHILVD
EYQDTNRLQSSILLALKPDGRGLTVVGDDAQSIYSFRAATVRNILDFPQSFSPRAEMITL
DRNYRSTQPVLAAANGVIGLARERFTKNLWTDRSSTQKPQLVTVHDETDQARYIVEEVLA
NREQGALLKHQAVLFRTSSHSGPLEIELTRRNIPFVKFGGLKFLDAAHVKDVLALLRFAE
NPRDRVAGFRILHLLPGIGPATAQRVLDQMAESSDPLAALGQLPAPPRTGADWTDFVRTI
ENLRYSEWPADLERVRLWYEPHLDRLHEDSETRRADLMQLEQIASGYASREKFLTELTLD
PPDATSDKSGPPMRDEDYLILSTIHSAKGQEWKSVFVLNVVDGCMPSDLGAGTSAELEEE
RRLLYVAMTRAKDDLHLVVPQRFFVHGQVAKGDRHVYASRTRFIPEPLVYLFERTAWPKA
GASSARTAAQGPKVDIGARMRGMWR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacatatctggacacgctcaatgcggagcaacgccgcgccgtggagcatggcgtg
gccgatggcgcgaccgtgggcgcgcccctgctcgtcatcgccggtgcgggctccggcaag
accaacacgctggcccatcgcgtcgcgcatttgatcgtcgcggggagcgatccgcgccgc
atcctcctgatgacgttttcgcgccgcgcagcggccgagatggccggccgggtcgagcgc
atcgcccgaaaagtgcttggcgagaacaacgccgcgatcatgcgcgacgcgctcagctgg
gccggcacgttccacggcatcggcgcacggttgctgcgcgaatatgccgagcggatcggc
gtcgatcctgccttcaccatccacgaccgcgaggattccgccgacctgatgaacctggtc
cggcacgagcgcggattgtcgaagacggagagccgctttcccgccaagggcacatgcctg
tcgatctactcgcgctgcgtcaatgccgagatggagatcgagaaggtgttgggggtgcac
tatccctggtgcgcaggctgggcggccgagctgaagggcctgttcgcggcctatgtcgag
gccaagcaggcccagcacgtgctcgattacgacgacctcctgctctactggtcgcagatg
atgagtgatgcgctgatcgcggaagaaatcggcggccgcttcgatcacatattggtcgac
gaatatcaggacaccaaccggctgcaatcctcgatcctgttggcgctgaagccggacggt
cgcggcctcaccgtcgtcggcgacgacgcgcagtcgatctattcgttccgcgccgccact
gtccgcaatatcctcgattttccgcagagcttctcgccgcgcgccgagatgatcacgctc
gaccgcaattaccgctcgacgcaacccgtgctggcggcggccaacggcgtcatcggcctg
gcgcgcgagcgcttcacaaaaaacctctggaccgaccgcagctccacgcaaaagccacaa
ctcgtcaccgtgcatgatgagaccgaccaggcccgctacatcgtcgaggaggtgctggcc
aatcgcgagcaaggcgcgctcttgaagcaccaggcggtgctgttccggacgtcctcgcat
tccggtcctctcgagatcgagctgacccgccgcaacatcccgttcgtgaaattcggcggg
ctgaagtttctcgatgccgcgcatgtcaaggacgtgctggcgctgctgcgctttgccgaa
aacccacgcgaccgcgtcgcgggatttcgcattctgcatctcttgcccggcatcggacct
gcgacggcgcagcgcgtgctcgaccagatggcggagagctccgatccgctcgccgcgctc
ggccagctcccggcgccgccgcgcaccggggcggactggaccgacttcgtccgcacgatc
gaaaatttgcgctattcggaatggccggccgatctcgaacgcgtgcggctctggtacgaa
ccgcatctcgatcgcctccacgaggattccgagacgcgccgcgccgatctgatgcagctc
gagcagatcgcgagcggctatgcctcgcgcgagaaattcctgaccgagctcacgctcgat
ccgccggatgcgaccagcgacaaatccggaccacccatgcgcgacgaggactatctgatc
ctctccaccatccactccgccaagggccaggagtggaaatcggtgttcgtgctcaatgtc
gtcgacggctgcatgccgtcggatctcggcgccggcaccagcgccgagctcgaggaggaa
cgccgcctgctctatgtcgcgatgacgcgcgccaaggacgatctgcacctcgtggtgccg
cagcgcttctttgtccacggccaggtcgccaagggtgaccgccacgtctacgcctcgcgc
acccgcttcatcccggagccgctcgtctatctgttcgagcgcaccgcttggccaaaggcc
ggcgcaagctcagcgcgcactgccgcgcaagggccaaaggtcgacatcggcgcgcggatg
cgcgggatgtggcggtag
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