Bradyrhizobium sp. BF49: BF49_6466
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Entry
BF49_6466 CDS
T04337
Name
(GenBank) DNA topoisomerase I EC 59912
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
brad
Bradyrhizobium sp. BF49
Brite
KEGG Orthology (KO) [BR:
brad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brad03032
]
BF49_6466
03400 DNA repair and recombination proteins [BR:
brad03400
]
BF49_6466
Enzymes [BR:
brad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BF49_6466
DNA replication proteins [BR:
brad03032
]
Prokaryotic type
DNA Topoisomerases
BF49_6466
DNA repair and recombination proteins [BR:
brad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BF49_6466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Milton
Motif
Other DBs
NCBI-ProteinID:
CUT15386
LinkDB
All DBs
Position
I:complement(6596652..6599411)
Genome browser
AA seq
919 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDANFKMIWEVDPKAAG
RLNDIAKSLKNADRLILATDPDREGEAISWHVLEVLKEKRAIKDHKIERVVFNAITKQAV
TDAMKHPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVAREYWSLIATLLTPRGDAFEARLVGADGKKIQRLDIGTGAEAEDFKKALEAA
AYAVTAVDAKPARRNPQAPFTTSTLQQEASRKYGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIDPSAITQARKVIGEDYGNAYVPDAPRQYQAKAKNAQEAHEAIRPTDMSR
RPDSMSRKLESDQARLYELIWKRTIASQMESAELERTTVDITAKVGGRTLDLRATGQVVK
FDGFLALYQEGRDDEEDEDSRRLPAMSPNDALKRQSLAVTQHFTEPPPRFSEASLVKRME
ELGIGRPSTYASILQVLKDRGYVKLEKKRLHGEDKGRVVVAFLESFFARYVEYDFTANLE
EQLDRISNNEISWQQVLKDFWTGFIGAVDEIKDLRVAQVLDVLDDMLGQHIYPARTDGGD
IRQCPSCGNGRLNLKAGKFGAFVGCSNYPECRYTRQLAADGEATADRSLGQDPDTGRDVW
VKAGRFGPYIQLGEQKDYAEGEKPKRAGIPKGTSPGDVELELALKLLSLPREIGKHPETG
EPITAGLGRFGPFVKHEKTYASLEAGDEVFDIGINRAVTLIAEKIAKGPSRRFGADPGKA
IGDHPTLGTVTVKGGRYGAYVTAGGVNATIPSDIEKDAITLPQAIALIDERAAKGGGKKP
KKAAKPAKAKKAAAKAADGDDAAPKIKKPAAKKAAKPKSESTSKARAAVSSTAKTSAIKT
SPTKAAGAKAPAKKSAGTK
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcattgtggagtcgccggcgaaagccaagacgatcaacaagtatttgggc
tcgtcctacgaggttctggcctcgtttggccatgtccgcgacttgcccgcgaagaacggc
tccgtcgatcccgacgccaatttcaagatgatctgggaagtcgaccccaaggcggccggc
cggctcaacgacatcgccaagtccctcaagaacgccgatcgcctgattctcgcaaccgac
cctgatcgcgagggcgaggccatctcctggcacgtgctggaggtcctgaaagagaagcgt
gcgatcaaggaccacaagatcgagcgcgtggtgttcaacgccatcaccaagcaggcggtc
acggacgccatgaagcatccgcgccagatcgacggtgcgctggtcgacgcctatatggcg
cggcgcgcgctggactatctggtcggcttcaccctctcccccgtgctgtggcgcaagctg
ccgggcgcccgctcggccggccgcgtgcagtcggtggcgctgcggctggtctgcgaccgc
gagctcgagatcgaaaagttcgtcgcgcgcgaatactggtcgctgatcgcgacgctgctg
acgccgcgcggcgacgccttcgaggcccgtctcgtcggcgctgacggcaagaagatccag
cgcctcgacatcggcaccggcgcggaagccgaggacttcaagaaggcgctggaagcagcc
gcctacgctgtgaccgcggtcgatgccaagccggcccggcgcaatccgcaggcgcccttc
acgacctcgacgctgcagcaggaagccagccgcaaatatggctttgcgccggcgcacacc
atgcgcatcgcgcagcggctctatgaaggcatcgacatcggcggcgagaccaccggactc
attacttatatgcgtaccgacggcgtgcagatcgatccgtccgcgatcacccaggcacgc
aaggtgatcggcgaggattacggcaacgcctatgtgccggacgcgccgcgccagtaccag
gccaaggccaagaacgcccaggaagcccacgaagcgatccggccgaccgacatgtcgcgc
cgccccgacagcatgagccgcaagctcgaatccgaccaggcgagactatatgaactgatc
tggaagcgcaccatcgcgagccagatggaatcggccgagctggaacgcaccacggtcgac
atcacggcgaaggtcggcggccgcacgctggacctgcgcgccaccggccaggtcgtcaag
ttcgacggcttcctcgcactttatcaggaaggccgcgacgacgaggaggacgaggactcc
cgccgcctgcccgcgatgagccccaacgacgcgctgaagcggcagtcgctcgccgtcacc
cagcacttcaccgagccgccgccacgcttctccgaggcctcgctggtcaagcgcatggaa
gagctcggcatcggccggccctcgacctatgcctcgatcctccaggtcctcaaggaccgc
ggctacgtcaagctcgagaagaagcgcctgcacggcgaggacaagggccgcgtcgtggtc
gcgttcctcgaaagcttctttgcccgctacgtcgaatacgacttcaccgccaatctggaa
gagcagctcgaccgcatctccaacaacgagatctcctggcagcaggtgctgaaggatttc
tggaccggcttcatcggcgccgtcgacgagatcaaggatctgcgcgtggcgcaggtgctc
gacgtgctcgacgacatgctgggacagcacatctatccggcgcgcaccgacggcggcgac
atcaggcaatgtccgagctgcggcaacggacggctcaatctcaaagccggcaagttcggc
gccttcgtcggctgctcgaactatccggaatgccgctacacccgtcagctcgccgccgac
ggcgaggcaacggctgatcgttcgctcggccaggaccctgatacgggtcgcgatgtctgg
gtcaaggccggccggttcggcccctacatccagctcggcgagcagaaggattatgcggag
ggcgagaagcccaagcgcgcgggcattcccaaggggacgtcccctggagatgtcgagctc
gagcttgcgctcaagctgctgtcgctgccgcgcgagatcggcaagcatccggaaaccggt
gagcccatcaccgcaggcctcggccgcttcgggccgttcgtgaagcacgagaagacctat
gccagcctcgaggccggcgacgaagtgttcgacatcggcatcaaccgcgcggtgaccctg
atcgcggagaagatcgccaagggcccgagccgccgcttcggcgccgatcccggcaaggcg
atcggcgatcatcccaccctcggcaccgtcacggtgaagggcggccgctacggcgcctat
gtcacggcgggcggcgtcaacgcgacgatcccgagcgacatcgagaaagacgccatcacg
ctgccgcaggcgatcgcgctgatcgacgagcgcgcggccaagggcggcggcaagaagccg
aagaaggcggctaagccggccaaggccaagaaggctgcggcgaaggccgccgacggcgat
gacgccgcgccaaaaatcaaaaagccggccgcgaagaaggcggccaaacccaaatccgaa
tccaccagcaaggcgcgcgccgccgtgtcgtcgacggccaagacttcggccatcaagact
tcgccgaccaaggcagctggcgccaaagctccggccaagaagagtgccggcaccaaatag
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