Bradyrhizobium sp. BF49: BF49_6697
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Entry
BF49_6697 CDS
T04337
Name
(GenBank) DNA polymerase III alpha subunit EC 2777
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
brad
Bradyrhizobium sp. BF49
Pathway
brad03030
DNA replication
brad03430
Mismatch repair
brad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BF49_6697
03430 Mismatch repair
BF49_6697
03440 Homologous recombination
BF49_6697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brad03032
]
BF49_6697
03400 DNA repair and recombination proteins [BR:
brad03400
]
BF49_6697
Enzymes [BR:
brad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BF49_6697
DNA replication proteins [BR:
brad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BF49_6697
DNA repair and recombination proteins [BR:
brad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BF49_6697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
HROB
T2SSK
DUF655
DUF6374
Motif
Other DBs
NCBI-ProteinID:
CUT15617
LinkDB
All DBs
Position
I:6826254..6829820
Genome browser
AA seq
1188 aa
AA seq
DB search
MQDASGAGVRSISSARGRHATMPSAGFVHLHVHSAYSLLKGSIKIAKLAELAKKDHQPAL
ALTDTDNMFGALEFSDKMAGSGIQPIVGCEIAIEFGDQDPNARNVLLPSRVVLLAAQERG
YRSLMRLNSRAFLETPDTHAPHIKFDWLEGETEGLIALTGGPDGPISLALAGGYTELAAA
RCERLASLFGDRLYIELQRHNTDKERRVESHLIDIAYTKGLPLVATNEPYFAATDDYEAH
DALLCIAGGRLIAETEREQLTPDHRFKTRAEMAVLFADIPEALASTVEIAERCSFRPMTR
KPILPFFTVGAAASSDAAAVEAAELKRQAEEGLANRLRVHGLSQGTTEEDYSARLAFELD
VIMRMKYAGYFLIVSDFIKWAKGQGIPVGPGRGSGAGSLVAWALTITDLDPIKFGLLFER
FLNPERVSMPDFDIDFCQDRRGEVIRYVQERYGRDQVAQIITFGTLQARGVLRDVGRVLQ
MPYGQVDKLTKLVPQNPAAPVTLAAAIESEPKLQAFRDEDPVVARAFDIAQRLEGLTRHA
STHAAGIVIGDRPLSELVPMYRDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLDVA
CKLLKPRDIHVDLATLPIDDAESYQMLARGEVVGVFQVESQGMRRALVDMRPDRFEDIIA
LVALYRPGPMANIPTYCARKHGDEEPEYLHPVLEPILKETFGVIIYQEQVMQIAQVMSGY
SLGDADLLRRAMGKKIRAEMEKQREIFVAGAVKNGVPKGQADTIFELLAKFADYGFNKSH
AAAYALVSYHTAYMKAHYPVEFIAASMTLDLNNTDKLSEFRAEAQRLGIKVEPPNVNRSG
ATFEVGDKTIYYALAALKGVGIAAVEQIIAERTKNGLFTSLADFAARVSPRAINKRIIES
LAAAGAFDTLEPNRARVFAGADSILAACQRANEAATIGQNDMFGSSADAPTIMLPQIEPW
LPAERLRREYDAIGFFLSGHPLDDYATVLKRLRVQSWAEFSRAVKTGATAGKVAATVVSR
MERRTKTGNKMGIMGLSDPTGHFEAVLFSEGLAQYRDVLEPGAAVLLQLGAELQGEDVRA
RVLHAEPLDEAAAKTQKGLRIFVRDTKPLESIAKRLAGPDMAASNGAAPKVGSPGIAPRS
NGDGEVSLVMMLDLETEVEMKLPGRFKVSPQIAGAIKAVAGVVDVQQL
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggatgcctccggtgccggtgtccgctccatctcatctgcaagaggccgtcacgcg
accatgccgagcgccggatttgtccaccttcacgttcactcggcctattcgctgctcaag
ggctcgatcaagatcgccaagctcgccgagctagccaagaaagaccatcagccggcgctg
gcgctgaccgacaccgacaacatgttcggcgcgctggagttctccgacaagatggcgggc
tccggcatccagccgatcgtgggctgcgagatcgcgatcgagttcggggaccaggatccc
aatgcgcgcaacgtgcttctgccctcgcgcgtggtgctgctggccgcgcaggagcgtggc
taccgcagcctgatgcggctgaactcgcgcgcgttcctggagacgcccgacactcatgct
ccccacatcaagttcgactggctcgaaggcgagaccgaaggcctgatcgcgctgacgggc
ggtccggacgggccgatctcgctggcgcttgccggcggctataccgagctcgcggctgcg
cgctgcgagcgtctcgccagcctgttcggggaccgcctctacatcgaattgcaacgccac
aacaccgacaaggagcggcgggtcgaaagccacctgatcgacatcgcctacaccaagggc
ctgccgctggttgcgaccaacgagccgtatttcgccgcgaccgacgattacgaagcccat
gatgcgctgctctgcatcgccggcgggcggctgatcgcggagaccgagcgcgagcagctc
acgcccgatcaccgcttcaagacccgcgccgagatggcagtgctgttcgccgacattccg
gaggcgctggcctcgacggtcgagatcgccgagcgctgctcgttccggccgatgacgcgc
aagccgatcctgccgttcttcacggtcggcgctgccgcaagctccgatgccgccgcggtc
gaggcggccgaattgaagcggcaggcggaggaggggctcgccaaccgcctacgcgtgcac
ggactgtcgcaaggcacgactgaagaagattacagcgcgcggcttgcgttcgagctcgac
gtcatcatgcgcatgaaatacgcgggctacttcctgatcgtctccgacttcatcaaatgg
gcgaagggccagggcattccggtcgggccgggccgcggctccggcgcaggctcgctggtt
gcgtgggcgctcaccatcaccgacctcgacccgatcaaattcggcctgctgttcgagcgc
ttcctcaatccggaacgcgtctcgatgccggatttcgacatcgacttctgccaggaccgc
cgcggcgaggtgatcaggtacgtccaggagcgctacggtcgcgatcaggtcgcgcagatc
atcacgttcggtacgctacaggcccgcggcgtgctccgcgacgtcggccgcgtgctgcag
atgccctatggccaggtcgacaagctcacaaaactcgtgccgcagaatccggccgctccg
gtgacgcttgcggccgcgatcgagagcgagccgaagctccaggcgttccgcgacgaggac
ccggtggtggcgcgcgccttcgacatcgcacagcgcctcgaaggcctgacccgtcacgcc
tcgacgcacgcggccggcatcgtgatcggcgatcggccgctgagcgaactcgtgccgatg
tatcgcgaccccaaatccgacatgccggtgacccagttcaacatgaaatgggtcgagccg
gctggcctcgtgaagttcgacttcctcggcctgaagacgctgaccgtgctcgacgtcgcg
tgcaaactgctcaagccgcgcgacatccatgtcgatctcgccacgctgccgatcgacgat
gccgaaagctaccagatgctggcgcgcggcgaggtggtcggcgtgttccaggttgaaagc
cagggcatgcggcgcgcgctggtcgacatgcgccccgaccgtttcgaggacatcattgcg
ctggtcgcgctctatcgaccgggcccgatggcgaacatcccgacctattgcgcgcgcaag
cacggcgacgaggagccggaatatctccaccccgtactggagccgattctcaaggagacc
ttcggcgtcatcatctaccaggaacaggtgatgcagatcgcgcaggtgatgtcgggctat
tcgctcggcgacgccgacctgctgcgccgcgccatgggcaagaagatccgcgccgagatg
gagaagcagcgcgagatcttcgtcgccggcgccgtgaagaacggcgtcccgaaggggcag
gccgatacgatcttcgagctgctggcgaaattcgccgactacggcttcaacaagagccac
gcggcggcctatgccttggtgtcctaccacaccgcctacatgaaggcgcattacccggtg
gagttcatcgcggcgtcgatgacgctcgatctcaacaataccgacaagctgtccgaattt
cgcgccgaggcgcagcgcctcggcatcaaggtcgagccgcccaacgtcaaccgttccggc
gcgactttcgaggtcggcgacaagaccatctactacgcgctcgcggcgctgaagggcgtc
ggcatcgcggccgtcgagcagatcatcgcggagcggaccaaaaacggcttgttcacctcg
ctcgccgactttgccgcgcgggtgtcgccgcgcgcgatcaacaagcgcatcatcgaaagc
ctcgccgccgcgggcgccttcgacacgctggagccgaacagggcgcgggtcttcgccggc
gccgactcgattctcgccgcatgccagcgggcgaacgaagctgcaaccatcggccagaac
gacatgttcggcagctcggccgacgcgccgaccatcatgctgccgcagatcgagccctgg
ctgccggccgaacggctgcgccgcgaatatgacgcgatcggcttcttcctgtcgggacat
ccgctcgacgattacgccaccgtgctgaagcggctgcgcgtgcagtcctgggccgagttc
tcgcgcgcagtgaagaccggcgccaccgccggcaaggtcgccgccaccgtggtgtcgcgc
atggagcggcggaccaagaccggcaacaagatgggcatcatggggctctctgatcccacg
ggtcacttcgaggcggtgctgttctccgaaggcctcgcgcaatatcgcgacgtgctggag
ccgggcgccgcggtgctgctccagctcggcgccgagctccagggcgaggacgtccgcgcg
cgcgtgctccacgccgaaccgctggacgaggccgcggccaagacgcagaagggcctgcgc
atcttcgtgcgcgataccaagccgctggaatcgatcgccaagcgtctcgccggtcccgac
atggccgcttcgaacggcgccgcgccgaaggtcggcagtccgggcatcgcgccccgctcc
aacggcgacggcgaggtctcgctggtcatgatgctcgacctcgagaccgaggtcgagatg
aagctgcccggccgcttcaaggtctcgccgcagatcgccggcgccatcaaggcggtcgcc
ggcgtggtggacgtgcagcagctctag
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