KEGG   Bradyrhizobium sp. BWC-3-1: RX329_01010
Entry
RX329_01010       CDS       T11861                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
brah  Bradyrhizobium sp. BWC-3-1
Pathway
brah03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:brah00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RX329_01010 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:brah03021]
    RX329_01010 (rho)
   03019 Messenger RNA biogenesis [BR:brah03019]
    RX329_01010 (rho)
Transcription machinery [BR:brah03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     RX329_01010 (rho)
Messenger RNA biogenesis [BR:brah03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     RX329_01010 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT AAA_25 AAA_22 S1CSD-TOTE-2 AAA DnaB_C Spore_III_AA
Other DBs
NCBI-ProteinID: WOH58747
LinkDB
Position
212009..213274
AA seq 421 aa
MREIKLQDLKSKTPAELVSFAEENGVENASTMRKQELLFAILKQLALAETDIVGEGVVEV
LSDGFGFLRSPDANYLPGPDDIYVSPSQIRRFGLRTGDTIEGHIRSPKEGERYFALLKVN
TLNFEDPEKAKHKVNFDNLTPLFPNQRFRMEIDDPTRKDLSARVIDIVAPIGKGQRALIV
APPRTGKTVLMQNIAHSIAHNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNSELILDRKVSDKRTFPA
IDISRSGTRKEELITDPVVLKKMYVLRRILNPMGTMDGIDFLLDKLRSTKSNSEFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcgggaaatcaaactccaggacctcaagtcgaagacgccggccgaactcgtctcgttc
gcggaagagaatggggtcgagaatgccagcaccatgcgcaagcaggagctgctgttcgcc
atcctcaagcagcttgcgctcgccgagaccgacatcgtcggcgaaggcgtcgtcgaggtt
ctctccgacggcttcggcttcctccgctcgcccgatgcgaattatctgccgggcccggat
gacatctacgtttcgccctcgcagatccgccgttttggcctgcgcaccggcgacactatc
gaaggccacatccgcagcccgaaggagggcgagcgctatttcgcgctgctgaaggtcaac
acgctcaatttcgaggacccggaaaaggccaagcacaaggtcaatttcgacaacctcacg
ccgctgtttccgaatcagcgcttccgcatggaaatcgacgaccccacgcggaaagacctg
tctgcaagggtgatcgacatcgttgcgccgatcggcaagggtcagcgcgcgctgatcgtc
gcgccgccgcgcacgggcaagaccgtgctgatgcagaacatcgcgcactcgatcgcgcat
aatcatcccgagtgctatctgatcgtgctcctgatcgacgaacgtccggaagaagtcacg
gacatgcagcgctcggtgaagggcgaggtcgtctcctcgaccttcgacgagccggcggtg
cgccatgtccaggtcgccgagatggtgatcgagaaggccaagcgtctggtcgagcatggc
cgcgacgtcgtgatcctgctggactccatcacgcgcctcggccgcgcctacaataccgtg
gtgccgtcatcgggcaaggtgctgaccggtggtgtcgatgccaacgcgctgcagcggccg
aagcggttcttcggcgccgcccgcaacatcgaagagggcggctcgctgacgatcatcgcg
actgcgctggttgataccggcagccgtatggacgaagtcatcttcgaagagttcaagggc
accggcaactccgagctgatcctcgatcgcaaggtgtcggacaagcggaccttcccggcg
atcgacatttcgcgctccggcacccgtaaggaagagctgatcaccgatccggtggtcttg
aagaagatgtacgtgctccgccgcatcctgaatccgatggggacgatggacggaatcgac
ttcctgctcgacaagctccgctcgaccaagagcaattccgagttcttcgattcgatgaac
acctga

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