Bradyrhizobium sp. BWC-3-1: RX329_01040
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Entry
RX329_01040 CDS
T11861
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
brah Bradyrhizobium sp. BWC-3-1
Pathway
brah03030
DNA replication
brah03430
Mismatch repair
brah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RX329_01040 (holA)
03430 Mismatch repair
RX329_01040 (holA)
03440 Homologous recombination
RX329_01040 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brah03032
]
RX329_01040 (holA)
03400 DNA repair and recombination proteins [BR:
brah03400
]
RX329_01040 (holA)
Enzymes [BR:
brah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RX329_01040 (holA)
DNA replication proteins [BR:
brah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RX329_01040 (holA)
DNA repair and recombination proteins [BR:
brah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RX329_01040 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
WOH58753
LinkDB
All DBs
Position
complement(220035..221063)
Genome browser
AA seq
342 aa
AA seq
DB search
MVALRGKEIDAFLARPDAGRPIILLYGPDAGLVRERADALIASAVDDPNDPFSLVKVDGD
ELSAEPSRLVDEAMTVPLFGGRRAIHVRAGSRSFASAIDTLAEMGVRDCRIVIEAGELRP
ESPLRKACERAKTAVAIACYPDTERDLAKLMEDELRIANLRIAQDARAALMSFLGGDRQA
SRNELRKLTLYAHGKGEITLDDVMAVVADASELKLDPIVDGAFAGRPEIVENEFAKAMIA
GTYPGVIISAAQRQAAWLHKSALAIADGTPASAVLDSGYPRLHFSRKPAVETALRNFSVA
RLAVIIEQLATAALDTRKQSTLAAAIAQRTLMAIAANAKRRS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcgctgcgcggaaaagagatcgacgcctttctcgcccgccccgatgcgggccgt
ccgatcatcctgctctatggtcccgacgccggcctggtccgcgaacgcgcggatgcgctg
atcgcctcggccgtcgacgatcccaatgatcccttctcgctggtcaaggtcgatggcgac
gagctctccgccgagccgtcgcgcctcgtcgacgaggccatgacggtgccgctgttcggc
ggccgccgcgccatccacgtgcgcgccggctcgcgcagctttgccagtgctatcgacaca
ctggcggagatgggcgtcagggattgccgcatcgtgatcgaggccggcgagctgcgtccg
gaatcgccactgcgcaaggcctgcgaacgcgccaagacggccgtcgcgatcgcctgctat
cccgataccgagcgcgatctcgccaagctgatggaagacgagctccgcatcgccaatttg
cgcatcgcgcaagatgcccgcgcggcgctgatgtcgttcctcggcggcgatcgccaggcc
tcccgcaacgagctgcgcaagctcacgctctatgcccatggcaagggcgagatcacgctg
gatgacgtgatggctgtcgtcgccgatgcgtcggaactgaaactcgatccgatcgtcgat
ggcgccttcgccggccggcccgagatcgtcgagaacgagtttgccaaagccatgatcgcc
ggcacctaccccggcgtgatcatctccgcggcgcagcgtcaggcggcgtggctgcacaaa
tcggcgctcgcaatcgccgacggcacgcccgcatccgcggtgctcgacagcggctatccg
cgcctgcatttttcgcggaagcccgcggtcgaaaccgcattgcgcaatttcagcgtggcg
cggctcgccgtcatcatcgagcagctcgcgaccgccgcgctcgatacccgcaagcaatcc
accctcgccgccgccatcgcccagcgcacgctgatggcgatcgccgcaaacgcgaagcgg
cggagctga
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