Bradyrhizobium sp. BWC-3-1: RX329_01780
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Entry
RX329_01780 CDS
T11861
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
brah Bradyrhizobium sp. BWC-3-1
Pathway
brah00300
Lysine biosynthesis
brah00470
D-Amino acid metabolism
brah01100
Metabolic pathways
brah01110
Biosynthesis of secondary metabolites
brah01120
Microbial metabolism in diverse environments
brah01230
Biosynthesis of amino acids
Module
brah_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
brah00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RX329_01780 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RX329_01780 (dapF)
Enzymes [BR:
brah01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RX329_01780 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
DUF2924
Response_reg
Motif
Other DBs
NCBI-ProteinID:
WOH58890
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All DBs
Position
368232..369107
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AA seq
291 aa
AA seq
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MSALANHAFAKMNGIGNEIVVVDMRDSTSKVTPDDARAVASPRGGVPYDQLMVLQKPRFD
GTEAFISIYNSDGSEAGACGNGMRCVVRRIFEKTGQSTATFETAAGLLNAWQGPAPDLYT
VDMGAPKFGWQDIPLDQEFRDTRYIELQIGPIDNPILHSPSVVSMGNPHAIFWVDDVNAY
DLERFGPLLENHPIFPERANITLAHIVDPQHITIRTWERGAGLTRACGSAACATAVAAAR
LKRAERNVEITLPGGKLGIEWRERDDHVLMTGTATFEYEGRFDPALFAPVG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctggccaaccacgcatttgccaagatgaacggcatcggcaacgagatcgtc
gttgtcgacatgcgcgattccacctcaaaggtcaccccggacgatgcccgcgcggtggca
tcgccgcgaggcggcgtgccctacgaccaactcatggtgctgcagaagccgcgcttcgac
ggcaccgaagcgttcatcagcatctacaacagtgacggctccgaggccggcgcctgcggc
aacggcatgcgctgcgtcgtgcggcgcatcttcgaaaagactggccagagcacggcaacg
ttcgagacggccgcgggcctgctcaatgcctggcagggtccggcgccggatctttatacg
gtggacatgggcgcgccgaagttcggctggcaggacattccgctcgaccaggaatttcgt
gacacccgctacatcgaattgcagatcggcccgatcgacaatccgatcctgcattcgccc
tcggtggtcagcatgggcaatccgcatgcgatcttctgggtcgatgacgtcaacgcctac
gacctcgagcgtttcggtccgctgctggagaaccatccgatcttcccggagcgcgccaac
atcacgctagcccatatcgtcgatccccagcacatcacgatccgcacctgggagcgcggc
gccggcctgaccagggcctgcggctcggccgcatgtgccacggcggtcgcggcggcgcgg
ctgaagcgcgccgagcgcaatgtcgagatcacgctgcccggcggcaagctcgggatcgaa
tggcgcgagcgcgacgatcacgtgctgatgacgggcacggcgaccttcgaatatgaaggc
cgtttcgatccggcgctgttcgcgccggtcgggtga
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