Bradyrhizobium sp. BWC-3-1: RX329_20315
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Entry
RX329_20315 CDS
T11861
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
brah Bradyrhizobium sp. BWC-3-1
Brite
KEGG Orthology (KO) [BR:
brah00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
brah01011
]
RX329_20315
Enzymes [BR:
brah01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RX329_20315
Peptidoglycan biosynthesis and degradation proteins [BR:
brah01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RX329_20315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLT
SLT_superhelical
Motif
Other DBs
NCBI-ProteinID:
WOH62615
LinkDB
All DBs
Position
complement(4187280..4189673)
Genome browser
AA seq
797 aa
AA seq
DB search
MAGLSAGCAAWAKSNETTAETAKETAKEIAKPAAKDTTKGASKGTGKDISKDAAKGASKG
ATSPPAKDAAKKPAKDAGKDAGKNAGKEPAKDKLKPAAVAPKPQPAAGGSVPKTAPAPAA
TAIVRPTAPASAKPVAAPVLAPATRQHAAPRKPVTPAAVAATSSTPQADKDTLETVIELV
RKRKAGDATSAAATISDPVARKLAEWIILRSEDNGATVERYRAFLSANPSWPSQTFLRRR
LEAAMWDDRRDDQVAWSWFENESPVSAKGRFTVAKAMLARGDRANAERLVRDAWRSDPMS
EETENNALDQFGALLTPGDQKARMDTLLYGSENEAALRAAKRLGAGYVALAKARIASLKK
APNARALLEAVPRELHGDPGFIFSKIQLLRREEKFAEAAQLMLSAPKDPGRLYNLDEWWI
ERRLLARKMIDTEEFRSAYLIARDAALPSRDIYKTEQEFTAGWIALRFLNDPAAATQHFA
RIGIGSVNPTTLARAGYWQGRAAEAAGRQQEARNAYARAAEQSTSYYGQLARAKLGLPQI
ELNAQPRSRGAERLEIVRAAQLLYELDEREMVIPLLADMGENGDPEALAGLGELTQRHSD
ARGMLLLGKAALNRGLPFDFYAYPVNGIPQFTPIGPEVERSIIYAIARQESAFNPSVVSP
AQAYGLMQVTPDAARYVCKRHGGTYDLGRLKNDSAYNATLGSAELGGLLEDYRGSYIMTF
AAYNAGRGSVKKWIDRYGDPRDPKVDAVDWVELIPFSETRNYVQRIMENLQVYRARFGGG
TRLQIEADLRRGAGSVE
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcagggctgtcggccggctgcgccgcctgggccaaatccaatgagacaaccgcggag
accgccaaggaaaccgcgaaggaaatcgcaaagccagccgccaaggacaccacgaagggg
gcgtccaagggaaccggcaaggacatttcgaaggacgccgccaagggcgcaagcaagggc
gcgaccagtccacccgccaaggatgccgcgaagaagcctgccaaggacgctggcaaggat
gctggcaagaacgcaggcaaggaacctgcaaaggacaagctgaagcctgcggctgtcgcg
ccgaaacctcagccggccgctggcggctcggtcccgaagaccgcacccgcaccggcagca
acggccatcgtcagaccgaccgccccggcctccgccaagcccgtcgcggctcctgtcctg
gctccggcgacccgccagcatgccgccccgcgcaagccggtcacaccggctgcggttgct
gcgacctcctcgacgccgcaagccgacaaggacacgctggagaccgtgatcgagctcgtg
cgcaagcgcaaggcgggcgacgccaccagtgccgcggccacgatctcggatccggtcgcg
cgaaaactcgcggaatggatcatccttcgcagcgaggacaatggcgcgactgtggagcgc
taccgcgccttcctgtccgccaatccgagctggccctcgcagaccttcctgcgccggcgc
ctggaggccgcgatgtgggacgacaggcgcgacgaccaggtcgcgtggtcgtggttcgag
aacgaatcccccgtgtccgccaagggccgcttcacggtcgccaaggcgatgctggcgcgc
ggcgaccgtgccaacgccgaacgtctggtgcgcgatgcctggcgcagcgacccgatgtcg
gaagagaccgaaaacaacgcactcgaccagttcggcgcgctgctgacgcccggcgatcag
aaggcgcggatggatacgctgctctacggcagcgagaacgaggccgcattgcgggctgca
aagcgcctcggggccggctatgtcgcactcgccaaagcccgcatcgcctccctcaagaaa
gcgccgaacgctcgtgcgctgctcgaagccgtgccgcgcgagctgcacggcgatccgggc
ttcatcttcagcaagatccagctgctgcgccgcgaggagaaatttgcggaagccgcccag
ctcatgctgtcggcaccgaaggatccgggccggctctacaatctcgacgaatggtggatc
gaacggcgcctcctggcgcgcaagatgatcgacaccgaggaattccgcagcgcctatctg
atcgcgcgcgatgcggccctgccctcgcgcgacatctacaagaccgagcaagagttcacc
gccggctggatcgcgctgcgcttcctcaacgatcccgcggccgccacccagcactttgcc
cgcatcgggatcggcagcgtcaatccgaccacgctggcgcgcgccggctattggcagggc
cgcgccgccgaagctgcaggccgccagcaggaggcgcgcaacgcctacgcgcgggccgcc
gagcaatccaccagctattacggccagctcgcacgcgccaagctcggcctgccgcagatc
gagctcaacgctcagccgcgcagccgcggtgccgaacggctggagatcgtgcgcgccgcg
cagctgctctacgagctcgacgagcgcgagatggtgataccgttgctcgccgacatgggc
gagaacggcgatcccgaagcgctagccggcctcggcgagctcacccagcgccacagcgac
gcgcgcggcatgctgctgctcggcaaggccgcgctcaatcgcgggctgccgttcgatttc
tatgcctatcccgtcaacggcattccgcaattcacgccgatcggacccgaggtcgagcgc
agcatcatctacgccatcgcgcggcaggagagcgccttcaatccctcggtcgtctcgccg
gcgcaggcctatgggctgatgcaggtgacgccggacgctgcgcgctatgtctgcaagcgg
cacggcgggacctacgatctggggcgtctgaagaacgattcggcctacaacgccacgctc
ggctcggccgagctcggtggactgctcgaagactatcgcggctcctacatcatgaccttc
gccgcttacaatgccggccgcggcagtgtgaagaagtggatcgaccgctacggcgatccg
cgtgaccccaaggtcgacgcggtcgactgggtcgagctgatcccgttctccgagacgcgc
aactatgtgcagcggatcatggagaaccttcaggtctaccgcgcccgcttcggcggcggc
acccggttgcagatcgaggctgatttgcgccgtggcgccggcagcgtggaatag
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