Bradyrhizobium sp. I71: FJV43_16135
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Entry
FJV43_16135 CDS
T11002
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
brai Bradyrhizobium sp. I71
Brite
KEGG Orthology (KO) [BR:
brai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brai03400
]
FJV43_16135 (addB)
Enzymes [BR:
brai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FJV43_16135 (addB)
DNA repair and recombination proteins [BR:
brai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FJV43_16135 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ULL01183
LinkDB
All DBs
Position
3331691..3334837
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AA seq
1048 aa
AA seq
DB search
MRVFSVPISVPFLRTVVMALLDGRLVEGFEARKEPARLADATLYLPTRRAMRVVREIFLD
EMKADAVVLPRIVALGDIDEDELAFAGESEQFSGAAPLDIPPRLGELERRLTLAQLVAAW
ARGPVLSPLVVGGPASTLALASDLARLIDDMVTRGVDWSALDGLVPDQLDRYWQHSLEFL
RIARIAWPNHLAEINRIEPAARRDLLIAAEAKRLTAHPGGPVIAAGSTGSMPATAKFLHA
VASLPHGAVVLPGLDTDLDDDAWRTIGGVRDALGKFVEHPASNHPQYAMHALLQRFGIKR
GDVELLQPPAQDGRDLLASESMRPSARTEVWHDRLKQPDVAAKIAGGMKNLAVVEAPNPE
MEALAIAIAMREARHLDKSAALATPDRALARRVMAALTRWDLAFDDSGGDVLMETSAGTF
ARLAAEAATRGLEPATLLAMLKHPLCRLGRAPGAWKMAIEGLELAVLRGTRPPAATSGLL
REFNRFREELAKLWRREVSALHRAEPRARLKAEDLDRIQALIDVLQKALAPIESLPPARP
YDFAEFAHRHREILIELSRDEQGIPLAFEDRDGLALASAFDDLLRSGTASGLMVPLPDYP
DVFQTAFGDRAVRRRDRPGARLQIYGPLESRLMQADRIIVGGLIEGVWPPAPRIDPWLSR
PMRHELGLDLPERRIGLSAHDFAQLLGGDEVILTHSAKAGGAPAVASRFLHRLEAVAGDD
LWNAAVRAGEKYVQFAAALDQPDEVRPVKQPEPRPPRAMRPLKMSVTEIEDWLRDPYTIY
AKRILRLDALDPVDMPLSAADRGSAIHDALGEFTEAYAAHLPDDPARVLRAIGEKHFAPL
MERPEARALWWPRFQRIARWFGEWETARRDAIEAITAETRGEITIPLDNARIFYLSARAD
RIERRQGGSYAILDYKTGQPPTGKQVRMGLSPQLTLEAAILREGGFPDIDAGSSVSQLVY
VRLSGNNPPGEERILELKFKQGDEPQPPDTAAAEARAKLEALIRAFEDESQAYTSLNLPM
WANRYGTYDDLARIKEWSAAGGLGIEEW
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttttcagcgttcccatctcagttccgtttctgcgcacggtcgtcatggccctg
ctcgacggccggctggtcgaggggttcgaggcccgcaaggaaccggcgcggctggccgac
gccacgctgtacctgccgaccaggcgtgcgatgcgcgtcgtgcgtgagatcttcctcgat
gagatgaaagcggacgcggtcgtgctgccgcgcatcgtcgcgctcggcgacatcgacgag
gacgagctcgccttcgccggcgagagtgaacagttttccggtgcagcgccgctcgacatt
ccgccgcggctgggcgagctcgaacggcggctgacgctggcgcagctcgtcgccgcctgg
gccaggggcccggtgctgtcgccactggtggtcggcgggccagcctcgacgctggcgctt
gcatccgatctcgcgcgcctgatcgacgacatggtcacgcgcggagtcgattggagcgcg
ctcgatggactggtaccggaccagctcgatcggtactggcagcactcgctcgaattcctg
cgcatcgcgcgcatcgcctggcccaatcatctcgcggagatcaatcggatcgagccggcc
gcgcggcgcgatctcctgatcgcggcggaagccaaacggctgaccgcgcatccgggcggg
ccggtgattgcggcggggtctaccggctcgatgccggccaccgcgaagttcttgcacgca
gtcgcgtcgctgccgcatggcgcggtggtgctgcccggcctcgacacggatctcgacgat
gacgcatggcgcaccatcggcggcgtgcgcgatgcgctcggcaagttcgtggagcatccg
gcctcgaaccatccgcaatatgccatgcacgcgctgctgcagcgtttcggtatcaagcgt
ggcgatgtcgaattgcttcagcccccggcgcaagacggccgcgatctgctcgcgtccgaa
tcgatgcggccgtccgccaggacggaagtctggcatgaccgcctgaagcagcctgacgtc
gccgcgaagatcgccggcggcatgaagaacctcgctgtcgtcgaggcccccaaccctgaa
atggaagcgctcgcgatcgccattgcgatgcgcgaggcgcggcatctcgacaaatcggcg
gcgctggcgacgcccgaccgcgcgctggcgcggcgggtgatggcggcgctgacccgatgg
gacctcgccttcgacgattcgggcggcgatgtgctgatggaaacatccgccggcactttc
gcgcgtctcgcggcagaggcggcgacaagggggcttgagccggcgacattgctggcgatg
ctgaagcatccgttatgccggctcggccgcgcgcccggcgcgtggaagatggcaatcgaa
ggcctcgagctcgcagtcctgcgcggcacgcgcccgccggcggccacctcaggcctgttg
cgcgaattcaaccgtttccgcgaggaactcgcaaagctctggcgccgcgaggtctccgcg
ctgcaccgcgccgagccgcgggcgcgtctcaaggcggaggatctcgatcgcatccaggcg
ctgatcgatgtcctgcaaaaggcattggcgccaatcgagagcctgccgcccgcgagacca
tatgacttcgccgagttcgcgcatcggcatcgcgagatcctgatcgagctgtcgcgcgac
gagcagggcatcccgctcgccttcgaggatcgcgatggtctcgcgcttgccagcgccttt
gacgatctcctgcgcagcggcacggccagcgggctgatggtgccgctgcccgactatccc
gacgtcttccagacggcgttcggcgatcgcgcggtgcggcggcgcgacagacccggcgcc
cgcttgcagatctacggcccgctggaatcgcggctgatgcaggccgaccgcatcatcgtg
ggcggcctgatcgaaggtgtctggccgccggcgccgcgcatcgatccctggctcagccgg
ccgatgcggcatgagctcgggctcgaccttccggagcgccgcatcggcctctccgcccat
gacttcgcgcagctgctcggcggcgacgaggtgatcctcacccattccgccaaggcgggc
ggcgcgccggcggtcgcctcgcgctttctgcatcggctggaggcggtcgcgggcgatgat
ctctggaacgcggctgtccgtgccggcgagaaatatgtgcagttcgcggccgcactggac
cagcccgacgaggtcagaccggtcaagcagccggagccgcggccgccgcgcgcgatgcgg
ccgctcaagatgtccgtcaccgaaatcgaagactggctgcgcgatccctacacgatttac
gccaaacgcatcctgcggctcgatgcgctcgatccggtcgacatgccgctctcggctgcc
gaccgcggctcggcgattcacgatgcgctcggcgagttcaccgaggcctatgccgcacat
ctgcccgacgatcccgcgcgcgtgctgcgtgcgatcggcgagaagcattttgcgccgctg
atggagcgccccgaggcacgggcgctgtggtggccacgcttccagcgcatcgcgcgctgg
ttcggcgaatgggagacggcgcggcgcgacgcaatcgaggcaatcacggccgagacccgg
ggcgagatcacgatcccgctcgacaacgcacgcattttctatctttccgcgcgcgcggac
cgcatcgagcgtcgccagggcggcagctacgccattctcgactacaagaccgggcagccg
ccgaccggcaagcaggtccgcatgggcctgtcaccgcagctcacgctggaagccgcgatt
ctgcgcgagggtggcttcccggacatcgacgccggctcctccgtgagccagctcgtctat
gtccgactcagcggcaacaatccgccgggcgaggagcgcatcctcgagctcaagttcaag
caaggcgacgagccgcagccgcccgacaccgcggcagccgaggcgcgagccaagctggaa
gcgctgatccgtgccttcgaggacgagagccaggcctatacctcgctgaatctgccgatg
tgggcgaaccgctacggcacctatgacgacctcgcccggatcaaggaatggtccgccgcc
ggaggattggggatcgaggaatggtga
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