Bradyrhizobium sp. I71: FJV43_17110
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Entry
FJV43_17110 CDS
T11002
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
brai Bradyrhizobium sp. I71
Brite
KEGG Orthology (KO) [BR:
brai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brai03032
]
FJV43_17110
03400 DNA repair and recombination proteins [BR:
brai03400
]
FJV43_17110
Enzymes [BR:
brai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FJV43_17110
DNA replication proteins [BR:
brai03032
]
Prokaryotic type
DNA Topoisomerases
FJV43_17110
DNA repair and recombination proteins [BR:
brai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FJV43_17110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF905
Motif
Other DBs
NCBI-ProteinID:
ULL01355
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All DBs
Position
3537661..3538827
Genome browser
AA seq
388 aa
AA seq
DB search
MMDQQNLGTKRLASADPAAIALAKALGQWPKPPSFRRPSPKKTFDAAPATVEALAREHGL
RLGDQNELTIRRIKRGKGYSFVRPNGAHIRDARIIRRLHAMAVPPAYREVRYSADPSSHL
QAVGRDAAGRLQYRYHADWEKVREHRKAHRLEKLVGALPKIRRKVSAFLSGDEPTREFAL
SAVIELIARTAIRPGNESYARLNGTRGATTLLKSNVTLEDDCFVLTFKAKGGKAVRKECD
AAKLVRAIGILQGVPGKRMFQYRDAYGIVRAVNTTQVNAFLREIAGIKISLKDFRTLMAS
AVVVESLSRITPATSQRGRKKQVLDAIRAAADKLSNTPAICRKSYVHDTIVTAFEEGILE
RFAATMKGQRSQARREQLLQQVVATAAV
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcagcagaatctcgggacgaagcggctcgcttcagccgatcctgcggccatt
gccctggccaaagccctcggacaatggcccaaaccgcccagtttcaggcgccccagcccg
aaaaagaccttcgatgcggcgccggcgacggtcgaggcgctcgccagggagcacggcttg
cggctcggcgaccagaacgagctcaccatccggcgcatcaagcgcggcaagggctactcc
ttcgtccgtcccaacggcgcgcatatccgcgacgcacgcatcatccgccggctgcacgcg
atggcggtgccgccggcctatcgcgaggtgcgttactccgccgatcccagctcgcacctc
caggcggtgggccgcgatgccgcgggccggctgcaatatcgctatcacgccgattgggag
aaggtccgcgagcaccgcaaggcgcaccggctggagaagctcgtcggcgcactgccaaaa
atccggcgcaaggtctcggcgttcctgtcgggcgacgagccgacgcgcgagttcgcgctc
tcggccgtgatcgagctgatcgcgcgcaccgcgatccgccccggcaacgaatcctatgcc
cgcctcaacggcacccgcggcgccaccacgctgctgaagtccaacgtcacgctcgaagac
gactgcttcgtgttgaccttcaaggcgaagggcggcaaggcggtgcggaaggagtgcgac
gccgccaagctggtgcgcgccatcggcatcctgcagggcgtccccggcaagcgcatgttc
cagtatcgcgatgcctatggcatcgtgcgcgcggtcaacaccacgcaggtgaatgcgttt
ctgcgcgagatcgccggaatcaagatctcgctgaaggattttcggacgctgatggcgtcc
gccgtcgtcgtggaatcgctgtcgcggatcacgccggcgacgagccagcgcggccgcaag
aagcaggtgctggacgccatccgcgccgccgcagacaagctctccaacacgccggcgatc
tgccgcaagagctacgtccacgataccatcgtcaccgcgttcgaggagggcatcctcgaa
cgctttgccgcgaccatgaagggccagcgttcgcaggcgcggcgcgagcagctcttgcag
caggtggtcgcgacggcggcggtgtaa
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