Bradyrhizobium sp. I71: FJV43_22800
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Entry
FJV43_22800 CDS
T11002
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
brai Bradyrhizobium sp. I71
Pathway
brai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
brai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FJV43_22800 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brai03400
]
FJV43_22800 (uvrB)
DNA repair and recombination proteins [BR:
brai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FJV43_22800 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FJV43_22800 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
AAA_16
Microtub_bd
Kinesin
DUF2963
DUF87
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
ULK95604
LinkDB
All DBs
Position
complement(4743024..4745987)
Genome browser
AA seq
987 aa
AA seq
DB search
MAKKPASSEKSGKSPKTKAPNSKAHRPDVQPIGPALAELLNPAINRGDAGLGSGTGLQPP
PDNSRDRRAGGEAAAHRARASTPKEFPQDTARPMPLRPNPQPPGARQAGLEEAPQANYGT
AATIPTLDPELARQLGLPTEEDDAEALARPPRSKMEALGVKATADALEALIREGRPEFRK
GDGSTKVWTPHRPPRPEKSEGGVRFEIKSSYEPKGDQPTAIAELVEGINRNDRSQVLLGV
TGSGKTYTMAKVIEATQRPALILAPNKTLAAQLYGEFRNFFPDNAVEYFVSYYDYYQPEA
YVPRTDTYIEKDSSINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYTAMTFA
LKKGERIDQRQLIADLVALQYKRTQADFTRGTFRVRGDVIDIFPAHYEDRAWRVNLFGDT
IETIEEFDPLTGHKQDELEFIKMYANSHYVTPRPTLVQAIKSIKFELKQRLDQLHDQGRL
LEAQRLEQRTTFDLEMMEATGSCAGIENYSRYLTGRRPGEPPPTLFEYVPDNALIFADES
HVTIPQIGAMFRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDMMRPQTVAVSATPGSWE
LNESGGVFVEQVIRPTGLIDPPVDIRPARTQVDDLVGEVRATAQAGYRSLITVLTKRMAE
DLTEYLHEQGIRVRYMHSDIDTIERIEIIRDLRLGAFDALVGINLLREGLDIPECALVAI
LDADKEGFLRSETSLIQTIGRAARNVDGKVILYADQMTGSMERAIAETNRRREKQVEYNT
ANGITPESVKKQIGDILNSVYERDHVLVEVGGHDMTDDVISIGHNFEAVLADLETRMREA
AADLNFEEAARLRDEVKRLRATELAVVDDPTAKQRTVQGKAGAYAGAKKYGDAANLPVSA
MKKKTVSSALKASGGGSGSKVHKPHLDEMHGPESLPYRENRALPSKPFGSTSRIIQPTDS
RQSGPEFGPAPKSTGGMPGRRGGWKKR
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaacctgcatcctccgaaaagtccggcaaatcccccaagaccaaggccccg
aactcgaaggcgcatcgccccgatgtgcagccgatcgggccggcgctggccgagctgctc
aatcccgcgatcaatcgcggcgatgccggccttggatccggcaccgggctgcaaccgccg
ccggacaattcgcgcgaccgccgcgccggaggcgaggccgctgcgcatcgcgcgcgggcc
tcgacgccgaaggaatttccgcaggacactgcgcggccgatgccgctgcggcccaatccg
cagccgccgggggcacgtcaggccggattggaagaggcgccgcaggccaattacggcacc
gcggccacgatcccgacgctcgatccggaactggcccgccagctcgggcttcccaccgag
gaggacgatgccgaggcgctggcgcggccgccgcgcagcaagatggaggcgctcggcgtc
aaggcgaccgcggatgcgctggaagcgctgatccgcgagggccggccggagttccgcaag
ggcgacggctccacgaaggtgtggacgccgcaccggccgccgcgcccggagaagtccgaa
ggcggcgtgcgcttcgagatcaagtcgtcctacgagcccaagggcgaccagccgaccgcg
atcgccgagctggtcgagggcatcaaccgcaacgaccgctcgcaggtgctgctcggcgtc
accggctcgggcaagacctacaccatggccaaggtgatcgaggcgacgcagcgcccggcc
ctgatcctggcgccgaacaagacgctggccgcccagctctacggcgagttcaggaacttc
ttcccggacaacgcggtcgagtacttcgtctcgtactacgactattaccagccggaggcc
tacgtcccccgcaccgacacctatatcgagaaggattcctccatcaacgagcagatcgac
cgcatgcgccactcggcgacgcgcgcgctgctcgagcgcgacgacgtcatcatcgtcgcc
tcggtgtcctgcatctacggtatcggttcggtcgagacctacaccgcgatgacgttcgcg
ctgaagaagggcgagcgcatcgaccagcgccagctcatcgccgacctcgtcgcgctgcaa
tacaagcgcacccaggccgatttcacccgcggcaccttccgtgtccgcggcgacgtcatc
gacatcttcccggcgcactatgaagaccgcgcctggcgcgtgaacctgttcggcgacacc
atcgagaccatcgaggagttcgacccgctcaccggccacaagcaggacgagctcgaattc
atcaagatgtacgccaattcgcactatgtgacgccgcgcccgacgctggtgcaggcgatc
aagtcgatcaagttcgagctgaagcagcggctcgaccagctgcacgaccaggggcgcctg
ctcgaggcgcagcggctggagcagcgtaccaccttcgacctcgagatgatggaagcgacc
ggaagctgcgccggcatcgagaactattcgcgctatctcacgggacgccgtcccggcgag
ccgccgccgacgctgttcgaatacgtccccgacaatgcgctgatcttcgctgacgagagc
cacgtcaccatcccgcagatcggcgccatgttccgcggcgacttccgccgcaaggcgacg
ctggccgaatacggcttccgcctgccctcctgcatggacaaccgccccttgcgcttcgag
gagtgggacatgatgcggccgcagaccgtcgccgtctccgctacgcccggcagctgggag
ctgaacgagagcggcggcgtgttcgtcgagcaggtgatccgcccgactggcctgatcgat
ccgcccgtcgacatccgcccggcgcgtacgcaggtagacgatcttgtcggcgaggtgcgc
gccaccgcgcaggccggctatcgctcgctgatcacggtgctcaccaagcgcatggcggag
gacctcaccgaatatctgcacgagcagggcatccgcgtccgctacatgcactcagacatc
gacaccatcgagcgcatcgagatcatccgcgacctgcgcctcggcgcgttcgacgcgctg
gtcggcatcaacctgctgcgcgaaggtctcgacattcccgaatgcgccctggtcgcgatt
ctcgacgccgacaaggaaggctttttgcgcagcgagacctcgctgatccagaccatcggc
cgcgccgcgcgcaacgtcgacggcaaggtgatcctctatgccgaccagatgaccggctcg
atggagcgcgccatcgccgagaccaaccgccgccgcgagaagcaggtcgagtacaacacc
gccaacggcatcacgccggagagcgtgaagaagcagatcggcgacatcctcaactcggtc
tacgagcgcgaccacgtgctggtcgaggtcggcggccacgacatgaccgacgacgtcatc
tcgatcggccacaatttcgaagccgtactcgccgatctcgaaacccgcatgcgcgaggcc
gccgccgacctgaacttcgaggaggccgcgcgcctgcgcgacgaagtcaagcgcctgcgc
gcgacagagctcgcggtggtcgacgaccccaccgcgaagcagcgcaccgtgcagggcaag
gccggcgcctatgccggagcgaagaagtacggcgacgccgcgaacttgccggtgagcgcc
atgaagaagaaaaccgtcagctcggcactgaaggcgagcggcggcggcagcggctcgaag
gtgcacaagccgcatctcgacgaaatgcacggcccggagtccctgccttaccgcgaaaac
cgcgcgctgccgtcgaagccgttcggcagcaccagccgcatcatccagccgacggattca
aggcagtcgggcccggagttcggaccggcgccgaagtcgacgggcggaatgccggggcga
cggggtgggtggaagaagaggtag
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