Bradyrhizobium sp. I71: FJV43_31670
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Entry
FJV43_31670 CDS
T11002
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
brai Bradyrhizobium sp. I71
Brite
KEGG Orthology (KO) [BR:
brai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brai03000
]
FJV43_31670
Transcription factors [BR:
brai03000
]
Prokaryotic type
Helix-turn-helix
Other families
FJV43_31670
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
GAF
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
Mg_chelatase
HTH_28
HTH_23
AAA_2
HTH_30
HTH_29
HTH_7
Xre-like-HTH
Phage_CP76
AAA
HTH_1
HTH_20
HTH_Tnp_1
Oxidored_nitro
HTH_17
HTH_22
Motif
Other DBs
NCBI-ProteinID:
ULK97217
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Position
6708883..6710949
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AA seq
688 aa
AA seq
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MLTETLMAKPPFSLEGYKVPGVTDVEQGQPYDERETNRAWENFLTSGDLRRENALVRGVI
EESWKRSVKSGVNAHCKGSNLVASPDHLYELRLKNDDLLGSSAQTFRRVAEVLGDAATML
VITDRNGVVLDVGGDQRTIDAGHDIRLEVGAAWGETVTGTNGIGTALITGKPVHVHAAEH
FSEGIKAWTCVGSPIRSPIDGSIIGIIDFSGPQAIFHRHNVALAVIAANHIELALSEKIR
LERIRLLEASISRMPGMGSGDGVVILDRFGRVVHHNDMASVRWRRIAQSGDLSVGNRILP
SSDGRLAQDLANALPEELQEQRIEPLLVDGIVKGAMLVLASRPRINSAASQVSPIARAAL
MSAKDAIVGCSEALMQAVEKVERAALGRTAILLEGETGVGKELFARLVHAASQKTGKEPF
VAFNCGAVSKELLGGELFGHAPGAYTGATREGKSGRFEFANGGVLSLDEIGEMPLDLQPY
LLRVLEERAVYRLGDNKPRPVDVRLVASTNRNLKQEVAEGRFRKDLYFRISVVKITIPPL
RARLGDVEILIDHFNRQFAETYSTEPVRFEAAAMELLRRYSWPGNVRELRNLIENLVLMT
LTGVVTPRELPEDFLEAASVLPSPGALQTRHGTTGPEAEEIARFDDIERRAIERAVANAG
GNIAAAAEKLGLSRATLYRKLHQYRSRI
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgctgacggaaacgctcatggctaagccgccgttttcgctggaaggctacaaggttccg
ggcgtcacggatgtcgagcagggacagccatacgatgagcgagagaccaacagagcgtgg
gaaaattttctgacgtccggcgacctcaggcgcgagaatgcgctggtgcgcggtgtcatt
gaggaatcatggaagcgcagcgtcaagtccggagtcaatgcccattgtaagggcagcaat
ctcgtggcctcgccggaccatctctatgagcttcgtctgaagaacgatgacttgctgggt
tcgagcgctcagacgttccgccgcgtcgccgaagtgcttggtgacgccgcgaccatgctg
gttatcaccgataggaacggcgtcgtgctcgatgtgggcggtgatcagcggacgattgat
gcagggcacgatattcgcctcgaggttggcgccgcctggggtgagacggtgacaggcact
aacggcatcggcactgcgctcatcacgggaaaaccggtccacgtccatgcagccgagcat
ttttccgaaggcatcaaagcctggacttgcgtcggtagccccattcgcagccccatcgac
ggcagtatcatcggcatcattgatttttccggacctcaggcgatctttcaccggcataac
gtcgcactggcggtgattgcggccaaccacatcgagcttgcgctctcggaaaagatacgc
cttgaaagaatacggctgctcgaggccagcatttcgcggatgccggggatgggcagcggc
gacggagtggtgattctcgaccgcttcggcagggtcgttcatcacaatgacatggcgtcg
gttcgttggcgacggatcgcgcagtccggcgacttgagcgtcggaaatcggattcttcca
agcagcgatggtcgtttggctcaagacctggccaatgcgctgccggaggaattgcaggaa
cagcggattgagccactgctcgtcgacggtattgtgaagggggcaatgctcgtgctcgca
tcgaggccgcggataaattccgccgcgtcccaagtttcgccgatagcgcgcgcagctctc
atgtcagcaaaggacgcgattgtcggatgcagcgaagcattgatgcaagcggtcgaaaag
gttgaacgggcggcactcggccgaacggctattctgctcgagggcgagacgggagttggc
aaggaactgtttgctcgtctcgttcacgccgccagccagaagaccggcaaggagcctttc
gtcgccttcaattgcggtgcggtctcgaaagagcttcttggcggtgaattgttcggacat
gccccaggtgcctataccggcgcgacgcgagaaggaaagtcaggccgttttgaatttgcc
aatggcggcgtgctcagcctcgacgagatcggcgagatgccgctggatctgcagccgtat
ctgctccgcgtgctggaagagcgtgcggtgtaccgcctcggcgacaacaagccgcgtccg
gtggacgtccggctcgtggcgtcgaccaaccggaatttgaagcaggaagtggcggaagga
cgtttccgcaaggatctgtatttccggatcagcgttgtcaagatcactatcccgccgctc
cgcgcgcgcttgggtgatgtcgagattctgatcgatcatttcaatcgacaattcgcggag
acctatagcaccgaaccggtacgtttcgaggcagccgcaatggaattgttgcggcgctat
agctggccgggcaacgttcgggaactgcgcaatctgatcgaaaacctggtgctgatgacg
ctcaccggcgtggtgacgcccagggagttgcccgaggatttcctggaagcagcatcggtc
ctgccaagtccgggcgccttgcagacaaggcatggcaccacgggaccagaagccgaagag
atcgcacgcttcgacgatatagagcgtcgtgccatcgaaagagccgtcgcaaacgcaggt
ggcaacattgcagccgccgccgagaagctcggcctttcgcgcgccacgctgtatcgcaaa
ttgcatcaatatcgttcgcggatatga
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