Bradyrhizobium sp. I71: FJV43_36685
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Entry
FJV43_36685 CDS
T11002
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
brai Bradyrhizobium sp. I71
Pathway
brai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
brai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FJV43_36685 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brai03400
]
FJV43_36685 (xth)
Enzymes [BR:
brai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
FJV43_36685 (xth)
DNA repair and recombination proteins [BR:
brai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FJV43_36685 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ULK98142
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All DBs
Position
7768434..7769231
Genome browser
AA seq
265 aa
AA seq
DB search
MSIRIATWNVNSVRQRIDLLLTWLKECQPDIVCLQEIKCVDEAFPRLEIEALGYNVVTHG
QKTFNGVALLSKLRFDETKSGLAGDDEDTHARFIEGVVTLKRGVLRIACLYLPNGNPVGS
DKYPYKLKWMSRLLEYSKERLKAEEPLILAGDFNVIPHARDVHNPAAWTEDALFKTETRE
SFQSLLGLGLTDALRAVTDEPGLYTFWDYQAGAWQKNQGLRIDHLLLSPQASDRLANVGI
DSYVRGWEKPSDHVPVWADLDLDAA
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcagaatagccacatggaacgtgaactcggtccggcagcggatcgatctcctg
ctgacctggctgaaggagtgccagcccgacatcgtctgcctccaggagatcaaatgcgtc
gacgaggcctttccgcggctggagatcgaggcgctgggctacaacgtcgtcacccatggg
cagaagacgttcaacggcgtcgccctgctctcgaagctgcgattcgatgagaccaagtcg
gggcttgccggcgacgacgaggatacgcatgcccgcttcatcgagggcgtggtcacgttg
aagcgcggggtgctgcgcatcgcctgcctttatctgcccaatggcaacccggtcggaagc
gacaaatatccctacaagctcaaatggatgtcccggcttcttgaatattcgaaggagcgc
ctcaaggctgaggagccgctgatccttgccggcgacttcaacgtcatcccgcatgcccgc
gacgtgcacaatccggccgcctggaccgaggacgccctgttcaagacggagacgcgcgag
agcttccaatccctgctcggcctcggcctgaccgacgccttgcgcgccgtcaccgacgag
cccgggctctacaccttctgggactaccaggccggggcctggcagaagaaccagggcctg
cgcatcgaccacctgctgctgtcgccacaggccagcgaccggctcgccaatgtcggcatc
gacagctatgtgcgcggttgggagaagccgtcggaccacgtgccggtgtgggcggatctg
gatctcgacgcggcgtga
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