Bradyrhizobium sp. NDS-1: RX330_00240
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Entry
RX330_00240 CDS
T11383
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bran Bradyrhizobium sp. NDS-1
Pathway
bran03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bran00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RX330_00240 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bran03019
]
RX330_00240 (pnp)
03016 Transfer RNA biogenesis [BR:
bran03016
]
RX330_00240 (pnp)
Enzymes [BR:
bran01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RX330_00240 (pnp)
Messenger RNA biogenesis [BR:
bran03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RX330_00240 (pnp)
Transfer RNA biogenesis [BR:
bran03016
]
Prokaryotic type
tRNA degradation factors
RX330_00240 (pnp)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WOH73588
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Position
55817..57973
Genome browser
AA seq
718 aa
AA seq
DB search
MFNKHSVEIDWGGRPLKLETGKIARQADGAVVATYGETVVLATVVAAKAPREGVDFLPLT
VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSH
DMENDPDIVALVASSAALTLSGAPFKGPIGAARVGFANDEFILNPTLDEMVDTQLDLVVA
GTADAVLMVESEAKELNEDIMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTTIDNSA
LEKEMLGLVEQELRAAYAIPVKQDRYAAVGKVKEKVIAHYFPEGQEPKYDKLRISGVFKE
LEAKIVRWNILDTGKRIDGRDSKTVRNIIAEVGVLPRAHGSALFTRGETQALVVTTLGTG
EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH
EFPYTTRVVSEITESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEDKRFAVLS
DILGDEDHLGDMDFKVAGTEQGITSLQMDIKIEGITEEIMKVALAQAKDGRIHILGEMAK
ALTNARAELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
SDGEAMKAAIKWIKSIASDPEVGQIYDGTVVKVMEFGAFVNFFGSKDGLVHISQLASSRV
QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQTTGEDLEGKGGESEKAPREAAGE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataagcattcagtcgagatcgactggggcggacgccctctcaagctggaaacc
ggcaagatcgcccgccaggccgacggcgccgtcgtcgccacctatggcgagaccgtggtg
cttgccaccgtcgtcgcggcgaaggccccgcgtgaaggcgtcgacttcctgccgctgacc
gtcgactaccaggaaaagacctacgctgcgggccgcattcccggcggctatttcaagcgc
gagggccgtccgaccgagaaggagacgctggtctcccgcctgatcgaccgtccgatccgt
ccgctgttcgtcgacggctggcgcaacgagacccaggtgatcgtcaccgttctctcgcat
gacatggagaacgacccggacatcgtcgcgctggtggcatcgtcggcggcgctgaccctg
tcgggcgcaccgttcaagggcccgatcggcgcggctcgcgtcggcttcgccaatgacgag
ttcattctcaacccgacgctcgacgagatggtcgacacccagctcgacctcgtcgtcgcc
ggcacggccgacgccgtcctgatggtggaatcggaagccaaggaactgaacgaagacatc
atgctcggcgccgtgatgttcggtcaccgccacttccagccggtgatcaacgcgatcatc
gagctcgccgagaaggccgccaaggagccgcgcgaagtcaccacgatcgacaattccgcg
ctcgagaaggaaatgctcggcctcgtcgagcaggaactgcgcgccgcctacgccattccg
gtcaagcaggatcgctatgccgcggtcggcaaggtcaaggaaaaggtgatcgcccactac
ttccccgaagggcaggagccgaaatacgacaagctgcgcatctccggcgtgttcaaggag
ctcgaggcgaagatcgttcgctggaacatcctggacacgggcaagcgcatcgacggccgc
gattccaagaccgtgcgcaacatcatcgccgaagtcggcgtgctgccccgcgcgcacggc
tcggcgctgttcacccgcggcgagacccaggcgctggtcgtgaccacgctcggcaccggc
gaggatgagcagtacatcgacgcgctgtcggggacgtacaaagagacgttcctgctgcac
tacaacttccctccctactcggtcggtgagaccggtcgcctcggcggcaccaagcgccgc
gagatcggccacggcaagctggcctggcgcgcgatccacccggtgctgccgccgcatcac
gaattcccctacaccacgcgcgtagtgtcggagatcaccgaatcgaacggctcgtcctcg
atggcttcggtctgcggcgcctcgctcgcgctgatggatgccggcgtgccgctgaagcgg
ccgaccgcgggcatcgcaatgggcctgatcctggaagacaagcgcttcgcggttctctcg
gacatcctcggcgacgaggaccatctcggagacatggacttcaaggtcgccggtaccgag
caaggcatcacctcgctccagatggacatcaagatcgagggcatcaccgaagagatcatg
aaggtggcgctcgcgcaggccaaggatggtcgtatccacatcctcggcgagatggccaag
gcgctgaccaacgcccgcgcagagctcggcgaatacgcgccgcgcatcgagaccttcaag
atcgccacggacaagatccgcgaagtgatcggcaccggcggcaaggtgatccgcgaaatc
gtcgagaagaccggcgccaaggtcaacatcgaggacgacggcaccgtgaaggtcgcctcc
tctgatggcgaggcgatgaaggccgcgatcaagtggatcaagtcgatcgcctccgatccg
gaagtcggccagatctatgacggcaccgtcgtcaaggtgatggagttcggcgccttcgtg
aacttcttcggttccaaggacggcctcgtccacatcagccagctcgcttcgtcgcgcgtg
cagaagacctccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggcttc
gacgaccgcggcaagacccgcctgtcgatgaaggtcgtcgaccagaccaccggcgaggac
ctcgaaggcaagggcggcgagagcgagaaggctccgcgcgaagccgccggcgagtaa
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