Bradyrhizobium sp. NDS-1: RX330_02590
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Entry
RX330_02590 CDS
T11383
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
bran Bradyrhizobium sp. NDS-1
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GFIT
Motif
Pfam:
AC_1
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
WOH74030
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Position
554946..558227
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AA seq
1093 aa
AA seq
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MLQTQTLVRGTGPVQVNFDGGTLRAKAGTTSFVSGFSGTELNIASGGLTVDTAGFDVTAS
SPFSGTGTFTKVGAGTLTLSGANSTNFSGVMAINAGTLSVAAATNLGTGGLAFDGGTLQN
TGAFTTALPVTLNAGGGTFQTDADLTLSGVLAGSGALTKTGGSMLTLTGANTYSGQTWIQ
TGTLALSGSGAIASSSRVVADGTFDISAATPANASIQSLAGSGTVNLGAKTLTLTNANDT
FAGAITGTGGLTVSAGIETLTGISNYTGVTNVTGTGTLQLLNGGQITGTSSTGLNGPSAT
ATVSGTGSLLQTGSLAVGGVSAGSNATLNVLNGGVVRTTANVTAAIAGPAAQTGTVNVDG
GGSLLDLAGGFGVGHQNGITNAFLNITNGGAVHSASGTIGAFAPGSGTKSVLISGTGSSW
TVTGALNFQSNASMSVLNGGAVTAATSTIGTSANGTANLLVSGVGSIYSVTGNQVMGAVN
GKGFVTLADGAQMTVGGALTLASSAGATGVLNIGGAEGQAATGAGTLNAATLVFGPGTAR
VNFNHTDANYVFSTAISGGGAVNQTGPGTTVLTGANTYSGPTTVSAGTLRAGGANVLSPN
SAFSVLSGGMLDLAGHDHTLTTLSNAGTVALNGVPGTTLTIANNYVGSGGLVQLNAALGG
DASPTDRLVVQGNTSGSSTLRVTNVGGAGAPTNEGIKVVDVVGASNGTFALQGNFVLQGQ
QAVVGGAYAYTLQKNGIASPGDGDWYLRSSLINPPPSAPAGPLYQPGVPLYENYAQVLLG
MNDAPSLQQRVGNRYWGGSEAMARAGVNTTQADASWTQSAFWGRIEGGQTSLQPSNTTGS
TYNADQMKAQTGLDGLVLDNAYGRLIVGLTAQYGLTTAYVNSFFGNGTIRASGSGVGATA
TWYGDNGFYVDGQAQTMFYRTDLSSALAGSMTHGNEGFGYAFSLESGKRFGVGNGFWLTP
QAQLAYSKVDFAPFADRFGAQVWLGNAESLLGRLGLSVNHQRTWNDASGIVRSDVYAIGN
LHYEFLNGTSIDVAGSGFASANNRLWGSIGGGGTYSWANGRYAVFGEVTYRASFDNADQN
HGYKGTGGFRLTW
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
gtgttgcagacgcagacgctcgtccgcggcaccggcccggttcaggtcaatttcgacggc
ggcacgctccgcgccaaagcaggtaccacgagcttcgtcagcggcttttccggcactgaa
ctcaatatcgcgtccggcggactgaccgtcgacacggcaggctttgacgttacggcgtcc
tcccccttcagcgggacgggcacgttcaccaaggtcggcgccggcacgctcacgctcagc
ggtgcaaacagcaccaatttttccggtgtgatggccatcaatgccggcacgctttcggtg
gccgccgcgaccaatctcggcacgggcggactggcctttgatggtggtacgctacagaac
acgggggccttcacgaccgcgctgccggtcacgctcaacgcgggtggcggcaccttccag
accgacgctgatctgacgctttccggagttctcgctggtagcggcgcgctcactaagacc
ggcggaagcatgctcacgctgacgggcgccaacacctactccggccagacctggattcag
accggcaccctggcgctgtccggcagcggcgcaattgccagctccagccgcgtggtcgcc
gacggcacgttcgatatttccgcggcgacaccagcgaacgcaagcattcagagccttgcc
ggcagcggcaccgtcaatctcggcgccaagactctgaccttgaccaatgccaacgacacg
ttcgcgggcgcgatcacaggcaccggcggcctgacggtttcggcgggcatagagaccctc
accgggatcagcaactacaccggcgtcacgaacgtgaccggcaccggcactttgcagctc
ctgaatggcggccagatcacgggcaccagcagtactgggctgaacggccccagcgcgacg
gcgacggtcagcggcaccggctcgctcctgcagaccgggagtctggcggtaggtggtgtc
agcgcgggaagcaacgccaccctgaacgtcctgaacggaggcgtcgtcaggacaactgcc
aacgtcacggccgctatcgccggccccgccgcacaaacagggacagtcaatgtcgatggc
gggggatcgctgctggacctcgccggcggcttcggggttggccatcaaaatgggattacg
aacgcattcctgaacatcacgaatggtggtgccgtccatagcgctagcgggacgatcgga
gccttcgcccccgggagcggcacaaagtcggttctgatctcggggacgggatcgagctgg
accgtgaccggagcgctcaatttccagagcaatgcatcgatgtcggtcctcaatggcggc
gcggtaaccgcagcgacatcaacgatcggcacctcggcgaatgggaccgccaatttgctg
gtttctggtgtcggctcaatctattccgtcaccggcaatcaggtgatgggagccgtcaac
ggcaaagggttcgtcacgctggcggatggcgcacaaatgacggtcggcggcgcattgacg
ctggcaagctccgccggagcaaccggcgtcctcaacatcggcggcgcggaaggccaggcg
gccaccggcgcgggtacgctcaatgcagcgacgctggtgttcggacccggaacggcacgc
gttaacttcaatcacaccgacgccaattatgtcttctcgaccgccatatcaggaggcggc
gcggtgaatcagaccgggcccggcaccaccgtgctcaccggcgccaacacctattcgggc
ccgaccacggtgtcggccggtacgctgcgcgcaggcggcgccaatgtgctgagcccgaac
tcggcgttctcagtgctctcaggcggcatgctcgatctcgcggggcacgaccatacgctg
acgacactgagcaacgccggcaccgttgcgctgaatggcgtgccgggaacgaccctcacc
atcgccaataactatgtcggcagtggtggcctggtccagctcaacgccgcgctcggcggc
gatgcgtcgccgaccgatcggctggtcgttcagggaaatacctcgggtagttccacgctc
agggtcaccaatgtcggcggcgccggtgcgcccacaaacgagggcatcaaggtcgtcgac
gtcgtcggcgcctcgaacggcacgttcgccctgcagggcaactttgtgcttcaaggccag
caggcggtggtcggaggcgcctatgcctatacgttgcagaagaacggcatcgctagtccc
ggtgacggcgattggtatctgcgctcgtcgctgatcaatccgcccccctcggcgcctgcc
ggcccgctctatcagcccggcgttcccctttacgagaactacgcgcaggtgctgctcggc
atgaacgacgcgccttcgctgcagcagcgcgtcggcaaccgctactgggggggcagcgag
gcgatggcgcgcgccggcgtcaacacgacccaggctgatgcgtcctggacgcagtccgcg
ttctggggccgcatcgagggcggccaaaccagcttgcagccgtccaacaccactggctcg
acctacaacgccgaccagatgaaggcgcagaccgggctcgacggccttgtgctcgacaat
gcctacggccgactcatcgtcgggctcacggcgcagtacggtctgaccacggcttacgtc
aactcgttcttcggcaacggcacaattcgcgcgtccggcagcggcgtcggcgctaccgca
acctggtacggcgacaacggcttctatgtcgacggccaggcgcagacgatgttctatcgc
accgatctgtcgtcggcgctggccggcagcatgacccatggcaacgaaggctttggctac
gccttcagcctcgaaagcggcaagcggttcggcgtcggcaacggcttctggctgacaccg
caggcacagctcgcctattcgaaggtcgacttcgctccgtttgccgatcgtttcggcgcg
caggtttggcttggcaatgccgaaagcctactcggccgcctcgggctctcggtcaaccac
cagcgcacctggaacgacgcgtcgggcatcgtccgctccgacgtctacgcgatcggcaat
ctgcactacgagttcctcaacggcaccagcatcgatgtcgcaggctcggggtttgctagc
gccaacaatcggctgtggggcagcatcggcggcggcggcacctatagctgggccaacggt
cgttacgctgtgttcggcgaggtcacgtaccgcgccagtttcgacaatgccgatcagaac
cacggctacaagggcactggcgggttccgcctgacgtggtga
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