Bradyrhizobium sp. NDS-1: RX330_05425
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Entry
RX330_05425 CDS
T11383
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bran Bradyrhizobium sp. NDS-1
Pathway
bran03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bran00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RX330_05425 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bran03019
]
RX330_05425 (groL)
03110 Chaperones and folding catalysts [BR:
bran03110
]
RX330_05425 (groL)
03029 Mitochondrial biogenesis [BR:
bran03029
]
RX330_05425 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bran04147
]
RX330_05425 (groL)
Enzymes [BR:
bran01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RX330_05425 (groL)
Messenger RNA biogenesis [BR:
bran03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RX330_05425 (groL)
Chaperones and folding catalysts [BR:
bran03110
]
Heat shock proteins
HSP60 / Chaperonin
RX330_05425 (groL)
Mitochondrial biogenesis [BR:
bran03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RX330_05425 (groL)
Exosome [BR:
bran04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RX330_05425 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RX330_05425 (groL)
Exosomal proteins of breast cancer cells
RX330_05425 (groL)
Exosomal proteins of colorectal cancer cells
RX330_05425 (groL)
Exosomal proteins of bladder cancer cells
RX330_05425 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
Motif
Other DBs
NCBI-ProteinID:
WOH74561
LinkDB
All DBs
Position
complement(1160344..1161975)
Genome browser
AA seq
543 aa
AA seq
DB search
MAAKDVKFSGDARERMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMVREVASKTNDLAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGI
DSAVAAVIKDIEKRAKPVAASSEVAQVGTISANGDAFIGKMIAQAMQKVGNEGVITVEEN
KSLDTEVDIVEGMKFDRGYLSPYFVTNPEKMTAELEDAYILLHEKKLSGLQAMLPVLEAV
VQSGKPLVIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDLAILTGGQL
ISEDLGMKLENVTVKMLGRAGKVVIDKENTTIVKGAGKKPEIEARVGQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVEDALNATRAAVQEGIVPGGGVALL
RAKKAVGRLTNANDDVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFD
AQNEDYVDMVAKGIIDPAKVVRTALQDASSVAGLLVTTEAMVAETPKKEAPPAMPAGGGM
GGF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagacgtcaagttttccggagacgcgcgcgaacgcatgctgcgcggcgtc
gacattctcgccaatgccgtcaaggtgacgctcggcccgaagggccgcaacgtcgtcatc
gagaagtcgttcggcgcgccccgcatcaccaaggacggcgtcaccgtcgccaaggagatc
gagctcgaggacaagttcgagaacatgggcgcccagatggtgcgtgaggtcgcctccaag
accaacgacctggccggcgacggcaccaccaccgcgaccgtgctggcccaggccatcgtg
cgcgaaggcgccaaggcggttgccgccggcatgaacccgatggacctcaagcgcggcatc
gacagcgcggtggcggccgtcatcaaggacatcgagaagcgcgccaagcccgtcgccgcc
tcctccgaggtcgcccaggtcggcaccatctccgccaacggcgatgccttcatcggcaag
atgatcgcccaggcgatgcagaaggtcggcaacgagggtgtcatcaccgtcgaagagaac
aagtcgctcgacaccgaagtcgacatcgtcgagggcatgaagttcgaccgcggctatctc
agcccctatttcgttaccaatcccgaaaagatgaccgccgagctcgaggacgcctacatc
ctcctgcacgagaagaagctctcgggcctgcaggccatgctgccggtgctggaagcggtg
gtgcagtcgggcaagccgctcgtcatcatcgcggaggacgtcgagggcgaggcgctggcc
accctggtcgtcaaccggctccgtggcggcctcaaggtggccgcggtgaaggcgccgggc
ttcggcgatcgccgcaaggccatgctcgaggacctcgcgatcctgaccggcggccagctc
atttccgaagacctcggcatgaagctggagaacgtcacggtgaagatgctgggccgcgcc
ggcaaggtcgtgatcgacaaggagaacaccacgatcgtcaagggtgccggcaagaagccg
gagatcgaggcccgcgtcggccagatcaaggcccagatcgaggaaaccacctcggactac
gaccgtgagaagctccaggagcgcctcgccaagctcgcgggcggcgtcgcggtgatccgc
gtcggcggcgcgaccgagatcgaggtcaaggagaagaaggaccgcgtcgaggacgccctc
aacgccacccgcgccgcggtgcaggaaggcatcgtccccggcggcggcgtcgcgctgctc
cgcgccaagaaggccgtgggccgtctcaccaacgccaatgacgacgtccaggccggcatc
aacatcgtgctgaaggcgcttgaagccccgatccgccagatcgcggagaacgccggcgtg
gaaggctcgatcgtcgtcggcaagatcctggagaacaagtccgagaccttcggcttcgac
gcccagaacgaggactatgtcgacatggtcgcgaagggcatcatcgatcccgccaaggtg
gtgcgcaccgcgctgcaggacgcctcctccgtggccggcctgctggtcaccaccgaggcc
atggtcgccgagaccccgaagaaggaagctccgcccgccatgcccgccggcggcggcatg
ggcggcttctga
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