KEGG   Bradyrhizobium sp. NDS-1: RX330_05970
Entry
RX330_05970       CDS       T11383                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
bran  Bradyrhizobium sp. NDS-1
Pathway
bran03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bran00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RX330_05970 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bran03400]
    RX330_05970 (uvrB)
DNA repair and recombination proteins [BR:bran03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RX330_05970 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      RX330_05970 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H AAA_22 Kinesin Microtub_bd DUF2963 DUF87
Other DBs
NCBI-ProteinID: WOH74667
LinkDB
Position
complement(1261089..1264061)
AA seq 990 aa
MAKKPASSEKSGKSPKTKAPNSKAHRPDVQPIGPALAELLNPAINRGDAGLGSGTGLQPP
PDNSRDRRSGGEAAAHRARASTPKEFPQDVTRPMPLRPHPQPPGARSSSELAGLEEAPQA
NYGTAATIPTLDPELARQLGLPTEEDDAEALARPPRSKMEALGVKATADALESLIREGRP
EFRKDDGSTKVWTPHRPPRPEKSEGGVRFEIKSSYEPRGDQPTAIAELVEGIGRNDRTQV
LLGVTGSGKTYTMAQVIEKTQRPALILAPNKTLAAQLYGEFKNFFPDNAVEYFVSYYDYY
QPEAYVPRTDTYIEKDSSINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYTA
MTFALKKGERIDQRQLIADLVALQYKRTQADFTRGTFRVRGDVIDIFPAHYEDRAWRVNL
FGDTIETIEEFDPLTGHKQDELEFIKMYANSHYVTPRPTLVQAIKSIKSELKQRLDQLHH
QGRLLEAQRLEQRTTFDLEMMEATGSCAGIENYSRYLTGRRPGEPPPTLFEYVPDNALIF
ADESHVTIPQIGAMFRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDMMRPQTIAVSATP
SGWELNESGGVFVEQVIRPTGLIDPPVDIRPARTQVDDLVGEVRATAQAGYRSLITVLTK
RMAEDLTEYLHEQGIRVRYMHSDIDTIERIEIIRDLRLGAFDALVGINLLREGLDIPECA
LVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADQMTGSMERAIAETNRRREKQV
EYNTANGITPESVKKQIGDILNSVYERDHVLVEVGGHDMTDDVISIGHNFEAVLADLETR
MREAAADLNFEEAARLRDEVKRLRATELAVVDDPTVKQRTVAGKAGAYAGTKKYGEAANL
PVSAMKNKSAATALKAGAGKGSRVHKPHLDEMHGPESLPYREKQTLPAKPFGGNSRIIQP
TDSRQSGPEFGPAPKSTGGQPGRRGGWKKR
NT seq 2973 nt   +upstreamnt  +downstreamnt
atggcgaagaaacctgcatcctccgaaaaatccggcaaatcccccaagaccaaggctccg
aactcgaaggcacatcgccccgatgtgcagccgatcgggccggcgctggccgaattgctc
aatcccgcgatcaaccgcggcgatgcggggcttggatccggcaccggcctgcagccgccg
ccggacaattcgcgcgaccggcgatccggcggcgaggccgcggcgcatcgggcgcgggcc
tcgacgcccaaggagtttccgcaggatgtgacgcggccgatgccgttgcggccccatccg
cagccgcccggcgcgcgctcgtcatccgaactggcgggcttggaggaagcgccgcaggcc
aattacggaaccgccgccacgatcccgacgctcgatccggaactggcgcggcagctcgga
ctgcccacggaggaagacgacgccgaggcgctggcgcgtccgccgcgcagcaagatggag
gcgctcggcgtcaaggcgaccgccgatgcgctggagtcgctgatccgcgagggccgtccg
gagttccgcaaggacgacggctccaccaaagtgtggacgccgcaccggccgccgcgcccg
gaaaagtccgaaggcggcgtgcgcttcgagatcaaatcgtcctacgagccgcgcggcgat
cagccgaccgcgatcgctgagctggtcgagggtatcggtcgcaacgaccgcacccaggtg
ctgctcggcgtcaccggctcgggcaagacctacacgatggcgcaggtgatagagaagacg
cagcgcccggcgctgatcctggcgccgaacaagacgctcgccgcccagctctacggcgag
ttcaagaacttcttcccggacaacgccgtcgagtatttcgtctcctattacgactactac
cagccggaagcctacgtcccgcgcaccgacacctatatcgagaaggattcctcgatcaac
gagcagatcgaccgcatgcgccactcggcgacgcgcgcgctgctcgaacgcgacgacgtc
atcatcgtcgcctcggtgtcctgcatctacggtatcggctcggttgagacctacaccgcg
atgaccttcgccctgaagaagggcgagcgcatcgaccagcgccagctcatcgccgacctc
gtcgcgctgcagtacaagcgcacccaggccgatttcacccgcggcacctttcgcgtgcgc
ggcgacgtcatcgacatcttcccggcgcactatgaggaccgcgcctggcgcgtgaacctg
ttcggcgacaccatcgagaccatcgaggagttcgatccgctcaccggccacaagcaggac
gagctcgaattcatcaagatgtacgccaattcgcactatgtgacgccgcgcccgacgctg
gtgcaggcgatcaagtcgatcaaatcagagctgaaacagcggctcgaccagctccatcat
cagggacgcctgctggaggcgcagcggctggagcagcgcaccactttcgacctcgagatg
atggaggcgacgggaagctgcgccggcatcgagaactattcgcgctatctcaccggacgc
cgccccggcgagccgccgccgacgttgttcgaatacgtccccgacaacgcgctgatcttc
gccgacgaaagccacgtcaccatcccgcagatcggcgccatgttccgcggcgacttccgc
cgcaaggcgacgctggccgagtacggctttcgcctgccgtcgtgcatggacaaccgcccg
ctccgcttcgaggaatgggacatgatgcggccgcagaccatcgcggtgtcggcgacgccc
agcggctgggagctgaacgagagcggcggcgtgttcgtcgagcaggtcatccgccccacc
ggactgatcgatcctcccgtcgatatccgaccggcccggacccaggtcgacgatctcgtc
ggcgaggtccgcgccacggcgcaggcgggctaccgctcgctgatcacggtgctcaccaag
cgcatggcggaggacctgaccgaatatctgcacgagcagggcattcgcgtgcgctacatg
cacagcgatatcgacaccatcgagcgcatcgagatcatccgcgatctgcgtctcggcgcc
ttcgacgcgctggtcggcatcaacctgctgcgcgaaggcctcgacattccggaatgcgcg
ctggtcgccattctcgacgccgacaaggagggctttttgcgcagcgagacctcgctgatc
cagaccatcggccgcgccgcgcgcaacgtcgacggcaaggtgatcctctatgccgaccag
atgacgggctcgatggagcgcgccatcgccgagaccaaccgccgccgcgagaagcaggtc
gagtacaacaccgccaacggcatcacgccggagagcgtgaagaagcagatcggcgacatc
ctcaactccgtctacgagcgcgaccacgtgctggtcgaggtcggcggccacgacatgacc
gacgacgtcatctcgatcggccacaatttcgaggccgtgctcgccgatctggaaacgcgg
atgcgcgaggccgccgcagatctgaacttcgaggaagccgcccgcctgcgcgacgaagtc
aagcgcctgcgtgccaccgagctcgcggtggtcgacgaccccacggtcaagcaacggacc
gtcgcgggcaaggccggcgcctatgccggcaccaagaagtacggcgaggccgcgaacctg
cccgtcagcgcgatgaagaacaagagcgccgcaacggcactcaaggccggcgccggcaag
ggctcacgcgtgcacaagccgcacctcgacgagatgcacggcccggagtcgctgccctat
cgcgagaagcagaccctgccggcgaagccgttcggcgggaacagccggatcatccagccg
acggattcacggcagtcgggcccggagttcgggcctgcgccgaagtcgacgggtgggcag
ccggggcgacggggtgggtggaagaagaggtag

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