Bradyrhizobium sp. NDS-1: RX330_10920
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Entry
RX330_10920 CDS
T11383
Name
(GenBank) strawberry notch family protein
KO
K26273
protein strawberry notch
Organism
bran Bradyrhizobium sp. NDS-1
Brite
KEGG Orthology (KO) [BR:
bran00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bran03036
]
RX330_10920
Chromosome and associated proteins [BR:
bran03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
RX330_10920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
WOH75568
LinkDB
All DBs
Position
2306602..2310924
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AA seq
1440 aa
AA seq
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MTESLAGGAAAAPFSMRATASLTSAAVRAARQLAVDLERGRRIDAAVLRSAVEAAFGASD
ATGVWNWKTAYDVCEAATVLFLRKFGPAIRTKAASTAAMLPMLAKIARCLPTHTRRSEDS
QALQQFSTPIPLGLAACTAAGITPSDRVLEPSAGTGLLAIFAELAGGTLVLNELAESRAA
LLDQLFPSLKVTRFDAAQIDDHLDAGVVPSVVLMNPPFSALANVDRRMADAAFRHIASAL
ARLCDGGRLVAITGASFAPDNPAWRDAFVRLQECGRVVFSASIDGAVYAKHGTQTDTRLL
VIDKKPAADPKIFPASLGVAGDVATLLDWVSQHVPPRLPVATPVMLDAIRRPTTSRPVSA
FAPRPSSTSKDGATEGVELHYETVDWTPPDGARLTDALYEEYALQAIRFPDAHAHPTKVV
QSAAMASVAPPKPSYRPHLPANVVADGILSDAQLESVIYAGEAHSEFLAGSWTVDATFDV
VAAARGDAENAVRFRRGWFLGDGTGAGKGRQVAGILVDNWLKGRRRAVWISKSDKLVEDA
QRDWSALGMERLLVTPLSRFRQGTPIRLAEGILFTTYATLRTDERGEKLSRVRQIVEWLG
SDFDGVIVFDESHAMQNAAGQKGERGDQAASQQGRAGLRLQHALPNARVVYVSATGATTV
HNLAYAQRLGLWGGADFPFATRAEFVEAIEEGGVAAMEVLARDLKALGLYAARSLSYEGV
AYELIEHQLAPEQVRIYDAYAGAFSVIHNNLDAAMRATNITGETGTLNGQAKSAARSAFE
SAKQRFFGHLLTSMKTPSLIRSIECDLDAGHAAVIQIVSTGEALMERRLAEIPTEEWGDV
RVDITPREYVLDYLAHSFPVQLYELFTDQEGNLCSRPVYRDGQPVESRDAVARRDRLIEK
LASLPPVPGALDQVVQRFGTDMVAEVTGRSRRIVRKGDRMVVENRAGSANLAETSAFMDD
VKRILVFSDAGGTGRSYHAELSARNRRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPL
FRPIATDVKAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESQYGRDALRQLY
TLLARGKVEGCPLEGFEDSTGLKLTDANGLRDDLPPITTFLNRLLALTIDLQNILFTIFE
QLLTARIEGAVASGTYDVGLETLRAESFVVTDRRTIYVHPGIGAETRLLTITQRQRNRPV
SLDDALARASDRNTALLINERSGRAAVQVSAPSFMLDDGEIEQRVRLIRPMEQHTMPLNM
MAESHWIEADRERFAAAWLAELAEIPEFTESTIHVVAGLLLPIWKRLPNESTRVYRLQTD
AGERIIGRKVSATWVANALAADAPALTPDAAFAALMEGRAVLELAEGLQLRRVRAMGAYR
IELSGFNDTMRDRLRAYGLFGEIISWKLRMFVPTDASGFEVLAKVLDTYPVARISEREAA
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatctctcgccggcggcgctgccgccgcgccgttctcgatgcgtgccactgca
agtctcacctccgccgccgtcagggccgcgcgacagctcgcggttgatctcgagcgcggc
cgtcgcatcgatgccgctgtgctgcgcagcgccgtggaagctgccttcggcgcttccgac
gccactggcgtctggaactggaagaccgcctatgatgtctgcgaggcggcaaccgttctg
ttccttcgcaagtttggcccggctatccggaccaaggctgcgtcaacggccgcgatgctg
ccgatgctcgcgaaaatcgcgcgctgtctgccgacccatacgcggcgttccgaggatagc
caagcccttcaacaattctcgacgccaatcccgctggggcttgccgcatgcaccgcggcc
ggcatcacgccctctgaccgggttttggagccctctgcggggaccggcttgctcgccatc
tttgccgagctcgccggcggcaccttggtgttgaacgagctggccgagtcccgcgcggca
ttgctcgatcaactgtttcccagccttaaagtcacgcggtttgacgccgcccagatcgat
gatcacctcgatgcgggtgtcgtaccgagcgtcgtcttgatgaacccgccgttctcggca
ttagcgaacgtcgatcgacggatggcggacgcggctttccggcacatcgcctcagccttg
gcgcgtctttgcgatggtgggcgtctggtcgctatcaccggcgcaagctttgcgccggac
aatccggcatggcgagatgccttcgttcgcctccaggaatgcgggcgggtggtgttttct
gcctccatcgatggcgcggtttacgcgaaacacggcacgcagacggacacgaggctgctc
gtaatcgacaagaagccggccgcagatccgaagatctttccagcatcgctgggcgtggca
ggcgatgtcgccacgttgctcgactgggtaagccagcatgtgcccccgaggctgcccgtt
gccacccccgtcatgctcgacgccatcaggcgccccacgacgtcgcggccggtcagcgcc
tttgcgccacggccgtcgtccacttccaaagatggcgcgaccgagggcgttgagctccac
tacgagacggtcgactggacgcctccggacggcgctcgactgaccgacgcgttgtatgag
gaatacgcactgcaggcgatccgttttccggacgcgcatgcgcatccgaccaaagtcgtg
cagtccgccgcgatggcctcggtcgccccgccgaagccgtcttaccggccacatctgccg
gccaatgtcgtggcggatggtatcctgtcggacgctcagcttgagagcgtcatctatgcc
ggcgaggcgcattccgagtttcttgcgggctcatggacggtcgatgcgacctttgatgtt
gtggcggccgcgcgcggcgatgcagaaaatgccgtgcggtttcggcgcggctggttcttg
ggtgacggcactggtgcgggcaaggggcggcaggtcgccggcatccttgtcgacaattgg
ctcaagggccgccgccgcgcggtctggatcagcaaatccgacaagctggtcgaagacgcg
cagcgcgactggtctgcgctcggcatggagcggttgctcgtgacgccgctctcacgtttc
cggcagggcacgccgatccggctcgcggaaggcatcctttttaccacctacgctacgctg
cgtaccgatgagcgcggcgagaagctttcgcgcgtgcggcagatcgtcgaatggttgggc
tccgacttcgatggagtgatcgtcttcgacgagagccacgcgatgcagaacgcggcaggc
cagaagggcgagcgcggcgaccaggcggcctcccagcaggggcgcgcggggctccggctc
cagcacgccttgccgaatgcccgcgtcgtctatgtctcggcgaccggcgccacgaccgtg
cacaatctcgcctacgcccagcgattgggattatggggcggcgccgatttcccgttcgcc
acccgcgccgagttcgtcgaggccatcgaggagggcggcgtagcggcgatggaggtgctc
gcgcgcgacctcaaggccctcggtctctacgcggcccgctcgctgtcctacgagggcgtc
gcgtacgagctcatcgagcaccagctcgcgcccgagcaggttcgcatctacgacgcctac
gccggcgcgttcagcgtcatacataacaatctcgatgcggcaatgcgggccaccaacatc
accggcgagaccggcacgctgaacggccaggccaaatcggccgcgcgatctgccttcgaa
agtgccaagcagcgcttttttggccacctcctgacctcgatgaagacgccatcgctgatc
cgctcgatcgagtgcgatcttgacgccggccatgccgccgtcatccagatcgtctcgacc
ggggaggcactgatggagcgccggctcgccgagatcccgaccgaggagtggggcgacgtc
cgggtcgacatcaccccgcgcgagtatgtgctcgactatctcgcccattcctttccggtc
cagctttacgagctcttcaccgaccaggaaggcaatctctgctcccggcctgtctatcgc
gacggccaaccagtcgagagccgggacgccgtcgctcgccgcgaccgcctcatcgagaag
ctcgcctcgttgccgccggtacctggtgcgctggaccaggtcgtccagcgcttcggcacc
gacatggtcgcagaggtgaccgggcgctcgcgccgcatcgttcgcaagggcgaccggatg
gtcgtcgaaaaccgggccggttcggccaacctcgccgagacgtcggcgttcatggatgac
gtcaagcggatcctcgtcttctccgacgccggcggcacggggaggagctaccatgcggag
ctctcggcccggaatcgccgcctgcgggtccactatttgctcgagcctggttggaaggcg
gatgccgcgatccaggggctcggccgcaccaaccggaccaaccaggcgcaaccgccgctg
tttcgcccgatcgcaaccgacgtgaaggccgaaaagcgcttcctcagcaccatcgcccgc
cggctcgatacgttgggcgccatcacgcgcggccagcgtcagaccggagggcagggcttg
ttccggcccgaggacaatctcgaaagccagtacgggcgcgatgcgctgcgtcagctctac
accttgctcgcgcgaggcaaggtcgagggctgcccgctcgaggggttcgaggattcgacc
ggcctgaagctcacggatgccaatgggctcagggatgacttgccgccgatcacgaccttc
ctgaaccggttgctggcgctcacgatcgatcttcagaatatcctgttcaccattttcgag
cagctcttgaccgcacggatcgagggtgcggtcgcgtcaggtacctatgacgtcgggctg
gaaacgctccgcgcggagagctttgtcgtcaccgaccggcgcacgatttatgtccatccg
ggcatcggcgccgagacccggctgctcaccatcacccagcgccagcgcaaccgtcctgtg
agcctggatgatgctcttgctcgtgcctccgatcgcaacactgccctgctgatcaatgag
cgctcgggacgagccgcggtgcaggtctcagccccgagcttcatgcttgacgacggcgag
atcgagcagcgcgtccgcctgatccggccgatggagcagcatacgatgcccctgaatatg
atggcggagagccactggatcgaagcggatcgcgaacgcttcgccgcggcctggctggcg
gagcttgccgagatccccgagttcacggaaagcacgatccatgtcgtggccggcttgctg
ctgccgatctggaagcggctgccgaacgagtcgacccgcgtctatcggctgcagaccgac
gcgggcgagcggatcattggccgcaaggtctcggcgacttgggtcgcgaacgcccttgcg
gcggacgcgccggcgctgacgccggacgccgcctttgccgcgctcatggagggacgggcg
gtcctcgagcttgcggaagggctccagctccgccgcgtccgcgcaatgggcgcataccgc
atcgaactgtctgggttcaacgacacgatgcgcgaccgcttgcgggcctacggcctcttt
ggagagatcatttcctggaagctgcggatgttcgtgcccacggacgcaagcggcttcgag
gtcctggcgaaggtgctcgacacctatcccgttgcgcgcatcagtgagcgggaggccgcc
tga
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