Bradyrhizobium sp. NDS-1: RX330_12895
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Entry
RX330_12895 CDS
T11383
Name
(GenBank) matrixin family metalloprotease
KO
K01406
serralysin [EC:
3.4.24.40
]
Organism
bran Bradyrhizobium sp. NDS-1
Pathway
bran01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bran00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
RX330_12895
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bran01002
]
RX330_12895
Enzymes [BR:
bran01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.40 serralysin
RX330_12895
Peptidases and inhibitors [BR:
bran01002
]
Metallo peptidases
Family M10
RX330_12895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
W_rich_C
Peptidase_M10_C
Peptidase_M10
HemolysinCabind
Reprolysin_3
Reprolysin_5
Astacin
DUF4953
Motif
Other DBs
NCBI-ProteinID:
WOH75909
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All DBs
Position
2777879..2780497
Genome browser
AA seq
872 aa
AA seq
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MATAVNVSATNNAEIDGLLSGVKWTGTITYSFPDASSDYPNPYYGGDSEPTTSGLASAPT
QIKAAINYAVGLILSYTNANIQYAGTNGADIMIAQSPAANPTAYAYYPGNYASGGDIWFG
TQYNFSLAKLGNYYFTTAMHELGHALGLKHSQEAGGPGNVAVPSAHDSSEYTVMSYRSYV
GASTTSGYTNEAYGYSQTYMANDILALQVMYGADYTTQSSNTVYTWNPTTGQQFINGVGQ
LAPGGGVGGSANRVYETVWDGGGVDTYDLSNYTTNLSINLNPGASSVFSSVQLANLGNGH
YASGNVYNAYLYNGDARSYIDNATGGSGNDTLVGNAIANALNGGGGNDTIVGGAGNDGIN
GGSGSDTAVYSGSRANYLVSYNSATQTFTLTDQRSGVPDGTDTVTGVEYFQFAGVTVAAA
SLVPSAIETFGSTSVALTGGNYYLNSISTGTGPVLKYAGAAVIAANYSTWSVIGAEQVTG
GGYDVVWKNSANAHYSVWSTDSTGNFITTLGSAPEMLGTDASLQALESTLQQDLNGDGTT
GVVSIPIVSGVEIETFGSTSAVLSGGNYYLNSISTGTGPVLKYAGAAVIAANYSTWSVIG
AEQVTGGGYDVVWKNSANAHYSVWSTDSNGNFLTTLAAAPEVLGIDASLQALEPTLHQDI
NGDGTIGLSLVPVNGVTIEAFGATRAVLFSSNYYLYDAAGTGPTLKYAGSVVNAANYSTW
SVIGAEQVSGGGYDVVWKNSANAHYSVWSTDSNGNFLTTLAASPEVLGTDPSLKALEPTL
YQDLNGDGAIGAASPATAGAGTSGDGFAFNFTEGGTPLTTSSELPDAMPAPANVQTTSEQ
WSQLTGSHDTAAAFDIVADFLHNLHGPGFLLT
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
ttggctaccgccgttaatgtcagtgccaccaacaatgccgagatcgacggcctgctgtcc
ggcgtcaaatggaccggcacgatcacctatagctttcccgacgcatccagcgactacccc
aatccctattacggcggcgacagcgagccgaccacatcgggccttgcctcggcgcccacc
cagatcaaggcggcgatcaattacgcggtcgggctgatcctcagttacaccaacgccaac
atccagtacgcgggaacgaacggcgccgacatcatgatcgcgcagtcgcccgcggccaat
ccaacggcctatgcctactatcccgggaattatgcgtccggcggcgacatctggttcggc
actcaatacaacttctcgctcgccaagctcggcaactattacttcacgaccgcgatgcac
gagctcggccacgccctcggtctcaagcacagccaggaggccggcggccccggcaacgtc
gctgtgccgagcgcgcacgacagcagcgaatataccgtcatgagctatcgcagctatgtc
ggcgcttcgactacgagcggctacaccaacgaagcgtacggatattcgcagacctacatg
gccaacgatattctcgcgctccaggtcatgtacggcgcggactacacgacccaaagcagc
aacaccgtctacacctggaatccgaccaccgggcagcagttcattaacggcgtcgggcag
ctcgcgccgggcggcggcgtcggcggctcggccaaccgcgtctacgagacggtctgggac
ggcggcggcgtcgatacttacgatctgtcgaactacacgacgaacctgagcatcaacctc
aatcccggtgcctcgtcggtgttctcctccgtgcaactggccaatctcggcaacggccat
tacgcatcgggcaacgtctacaacgcctatctgtacaacggcgacgcgcgctcctacatc
gacaacgccaccggcgggtccggcaacgacacgctggtgggcaacgcgatcgccaacgcg
ctgaacggcggcggcggcaacgacacgatcgtcggcggcgcgggcaacgacggcatcaat
ggcggctcgggcagcgacacggcggtgtattcgggcagccgggccaactacctggtctcg
tataattccgcgacccagacgttcactctgaccgaccagcgcagcggcgtgcccgatggt
accgatacggtcaccggcgtcgaatatttccagttcgcgggcgttacggttgccgccgcc
agcctcgtgccgagcgcgatcgagacgttcggatcgacgagcgtggctctgacaggcggt
aactattatctgaacagcatctcgaccggcaccggaccggtcctgaaatatgccggcgcc
gcggtgatcgcggccaattacagcacgtggtcggtcatcggcgccgagcaggtgacgggc
ggcggctacgacgtggtctggaagaattcggcgaacgcccactattcggtctggagtacg
gacagcaccggcaatttcatcacgactctcggctcggctccggagatgctggggacggac
gcctcgctacaggcgctggaatcgacgctgcaacaggatctcaatggcgacggcacgaca
ggggtggtcagcatccccatcgtcagcggcgtcgagatcgagacgttcggatcgaccagc
gcggtcctgtctggtggaaactattacctgaacagcatctcgactggcaccggaccggtc
ctgaaatatgccggcgctgcggtgatcgcggccaattacagcacgtggtcggtcatcggc
gccgagcaggtgacgggcggcggctacgacgtggtctggaagaattcggcgaacgcccat
tattcggtctggagcacggacagcaacggcaacttcctaaccacgctcgccgcggctccc
gaagtgctaggcatcgatgcgtcgctgcaggcgctggagccgacgctgcatcaggatatc
aacggcgacggcacgatcggtctctccttggttcccgtcaacggcgtcaccatcgaggca
ttcggagcgacccgtgcagtcttgtttagtagcaactactatctgtacgatgcggccggt
accggccccaccttgaaatacgctggctcggtcgtgaatgcggccaattacagcacgtgg
tcggtgatcggcgccgagcaggtgtccggcggcggctacgacgtggtctggaagaactcg
gcgaacgcccactattcggtctggagcacggacagcaatggcaacttcctgaccacgctc
gccgcgtctccggaagtgctgggaaccgacccatccttgaaggcgctggagccgacgctg
taccaggacctcaatggcgacggtgccatcggtgcagcgtcgcccgccacggcgggggcc
gggacgtccggtgacggctttgcgttcaacttcaccgagggcgggaccccattgaccact
tcgtccgagctaccggatgccatgcccgcgccagccaatgtgcagaccacgtcggagcag
tggtctcaactgacgggaagccacgacacggctgctgcgttcgacatagtggccgatttt
cttcacaacctgcacgggcccggcttcctgctgacctga
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