Bradyrhizobium sp. NDS-1: RX330_13245
Help
Entry
RX330_13245 CDS
T11383
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bran Bradyrhizobium sp. NDS-1
Pathway
bran00061
Fatty acid biosynthesis
bran00071
Fatty acid degradation
bran01100
Metabolic pathways
bran01212
Fatty acid metabolism
bran02024
Quorum sensing
bran04146
Peroxisome
Module
bran_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bran00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RX330_13245
00071 Fatty acid degradation
RX330_13245
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RX330_13245
09145 Cellular community - prokaryotes
02024 Quorum sensing
RX330_13245
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bran01004
]
RX330_13245
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bran04147
]
RX330_13245
Enzymes [BR:
bran01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RX330_13245
Lipid biosynthesis proteins [BR:
bran01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RX330_13245
Exosome [BR:
bran04147
]
Exosomal proteins
Exosomal proteins of breast milk
RX330_13245
Exosomal proteins of breast cancer cells
RX330_13245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF764
Motif
Other DBs
NCBI-ProteinID:
WOH75979
LinkDB
All DBs
Position
complement(2858747..2860678)
Genome browser
AA seq
643 aa
AA seq
DB search
MMDYAGRVAKADTYPKMLRLNAKEHGNEIALREKDLGLWRVFTWNDYQTRVREFALGLLE
VGLGRGDVIGIIGDNRPDWVAAEVATHAIGGLSLGLYRDVLDEEASYLLNYGEAQLVFAE
DEEQVDKLLTLAERAPKLKHIIYSDPRGMRKYDDPRLMSAETFAELGRARAAREPELYDR
LVDATKGEDVAILCTTSGTTSHPKLAMLAAGRVLGHCATYLAFDPKGPDDEYVSVLPLPW
IMEQVYVLGKGLLCRMKINFVEEPDTMMNDLREIAPTFVLFAPRVWESIAADVRAKVMDA
TPLKQRMFDVGMKSGLAALAQGKRSGLADAILFRALRDRLGFTRLRSAATGGAALGPETF
KFFQAMGVPLRTLYGQTELLGAYTLHPEGKVDPDTTGVPMSDSVEIRIDNADIHGVGEIV
VRHPNMFLGYYKNPEASVADIKDGWMLSGDAGYFNANQQLVVIDRIKDLAETSRGERFSP
QFIENKLKFSPYIAEAVVLGAGRDALAAMICIRYSIISKWAEKNRLSFTTYSDLASRPEV
YALLHKEVETVNATLPPAQRISRFLLLYKELDADDGELTRTRKVRRSVINEKYAGIIDAI
YRGDADIPVDTVIRFQDGTTQRVRTTLRVVDLGGHGHMAEAAE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatggattacgcaggccgcgtggcgaaggccgacacctatccgaagatgctccggctc
aacgcgaaggagcatggcaacgagatcgcattgcgcgagaaggatctcgggctctggcgg
gtgttcacctggaacgactatcagacccgcgtgcgcgagtttgcactcggtcttctcgaa
gtgggccttggccgcggcgacgtcatcggcatcatcggcgacaaccggccggactgggtg
gcggcggaagtggcgacacacgccattggcggcctcagcctcggactttatcgcgacgtg
ctcgacgaggaggcctcctatctcctcaactatggcgaggcgcagctcgtcttcgccgag
gatgaggagcaggtcgacaagctcctcaccctcgccgagcgcgcgccgaagctgaagcac
atcatctattccgatccgcgcggaatgaggaaatacgacgacccgcgactgatgtccgcg
gagacgtttgccgagctcggccgggcacgtgccgcgcgggagccggagctttacgatcgc
ctagtggacgcgaccaagggcgaggatgtcgcgatcctctgcacaacctcgggcacgacc
tcgcatcccaagctggcgatgcttgcggctggccgcgtgctcggccattgcgccacctat
ctcgcctttgacccgaagggccccgacgacgaatacgtctcggtgctgcccttgccctgg
atcatggaacaggtctacgtgctcggcaaaggcctcctgtgccggatgaagatcaacttc
gtcgaagagccggacaccatgatgaacgatctgcgcgagatcgcgccgacgttcgttctg
ttcgcgccccgcgtctgggagtcgatcgccgcggacgttcgcgccaaggtgatggacgcg
acgcccctaaagcagcgcatgttcgatgtcggcatgaagtcgggtctggccgctctcgcg
cagggcaagcgctccggtcttgccgacgcgatcctgttccgcgcgctgcgcgaccgcctt
ggcttcacgcgcttgcgctcggcggcgaccggcggcgccgcgctcggcccagagaccttc
aagtttttccaggcgatgggcgtgccgttgcgcacgctgtacggccagaccgagctgctg
ggagcctatacgctgcatcccgagggcaaggtcgatcctgacaccaccggcgtgccgatg
tccgacagcgtcgagatccgcatcgacaacgccgacatccacggcgtcggcgagatcgtg
gtgcggcaccccaacatgttccttggctattacaagaacccggaggcaagcgtcgccgac
atcaaggacggctggatgttgtcgggcgacgccggctatttcaacgcgaaccagcagctc
gtcgtcatagaccgaatcaaggacctcgccgaaacctcgcgcggcgagcgcttctcgccg
caattcatcgagaacaagctgaaattctcgccctatatcgccgaagccgtggtgctcggg
gctggtcgcgacgcgctcgcagcaatgatctgcatccgctactccatcatctccaaatgg
gcggagaagaaccgcctctcgttcacgacctacagcgacctcgcctcgcggcccgaagtc
tatgcgctgctccacaaggaggtcgagaccgtcaacgcgacgctgccgccggcccagcgc
atctcgcgcttcctgctgctctacaaggagctcgacgccgacgacggcgagctcacccgc
accagaaaggtgcgccgcagcgtcatcaacgagaaatacgccgggatcatcgacgccatc
taccgcggcgatgccgacatccccgtcgacaccgttatccgcttccaggacggcaccacg
cagcgtgtccgcacgacgctgcgcgtggtggatctcggcgggcacgggcacatggcggag
gctgcggagtga
DBGET
integrated database retrieval system
