KEGG   Bradyrhizobium sp. NDS-1: RX330_17630
Entry
RX330_17630       CDS       T11383                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
bran  Bradyrhizobium sp. NDS-1
Pathway
bran00740  Riboflavin metabolism
bran01100  Metabolic pathways
bran01110  Biosynthesis of secondary metabolites
bran01240  Biosynthesis of cofactors
bran02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bran00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    RX330_17630 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RX330_17630 (ribD)
Enzymes [BR:bran01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     RX330_17630 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     RX330_17630 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: WOH76814
LinkDB
Position
3740889..3742037
AA seq 382 aa
MIFRILEDQFAQKAREAKDADHRFMQLALALGKRGQGRTWPNPAVGAVIVKDGVIVGRGW
TQPGGRPHGEPEALLRAGEAARGATLYVTLEPCSHFGKSPPCADAVIAAGIKRVVAAIED
PNPEVAGQGHARLRAAGIAVDVGLCAAEAAFDHAGHFRRIRDKRPHVILKLAVSPDGKIG
AAGGKPVAITGEAVRNRVHLLRAQSDAILIGIGTVLADDPLLTCRLPGMAARSPVRVVLD
QSLRIPASSKLVGSARETPLWVMGSELAEAAAATRLGATGAQVIRIPPANASGLDLPAAL
HALAGKGITRLMVEGGSRVAASFIAADLVDEIWLFRGAEAVGAEGVDALDALPLSKITQS
QAYKVHASETFDRDTLTIYERA
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgatcttccgcatcctggaagatcagttcgcgcagaaggcccgtgaggccaaggacgcc
gatcatcgtttcatgcagcttgcgctggcgctgggtaagcgcgggcaggggcgcacctgg
cccaatccggccgttggcgccgtcatcgtcaaggacggggtcatcgtcgggcgaggctgg
acgcagcccggaggacggccgcatggcgagcccgaggccttgctgcgggcaggcgaggcg
gcccggggcgccacgctctatgtcacgctggagccgtgctcgcatttcggcaagtcgccg
ccttgcgccgatgcggtgatcgcggccggcatcaagcgggtggtggcggcgatcgaggat
cccaatcctgaggtcgcgggacagggccatgcgcgcctgcgcgccgccggcattgcggtg
gatgtcggattgtgcgcggcagaggccgcgttcgatcatgccgggcatttccgccggatc
cgggacaagcgtccgcatgtgatcctgaagctcgcggtgtcgcccgacggcaagatcggc
gccgccggcggcaagcccgtcgcgatcaccggcgaagctgtgcgcaatcgtgtgcatctg
ctccgcgcccagagcgatgccattctgatcggcatcggtacggtgctggcggacgatccg
cttctcacctgccgcctgccgggcatggccgcgcgctcgccagtgcgcgtggtgctcgat
cagagcctgcgcattcctgcatcgagcaagcttgtgggctccgcgcgcgagacgccgctc
tgggtgatgggatccgagcttgcggaagccgcagccgcgacgcgcctcggtgcgaccggc
gcgcaagtgatccgcatccctccggcaaatgcctcaggactcgatctgcccgccgcgctg
catgcgctggccgggaagggcatcacccgcctgatggtcgagggcggcagccgggttgcg
gcatccttcatcgcggccgatctcgtcgacgagatctggctgttccgcggggcggaagcg
gtgggcgccgagggcgtcgatgcgctcgatgcattgcccctgtcgaaaatcacgcagtcg
caggcttacaaggttcatgctagcgagacattcgacagggatactctcaccatctacgag
cgcgcgtaa

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