KEGG   Bradyrhizobium sp. NDS-1: RX330_20035
Entry
RX330_20035       CDS       T11383                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
bran  Bradyrhizobium sp. NDS-1
Pathway
bran02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bran00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RX330_20035
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:bran02022]
    RX330_20035
Two-component system [BR:bran02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   RX330_20035
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 Mg_chelatase AAA_5 AAA_16 AAA_2 AAA MCM bpMoxR AAA_30 AAA_19 ResIII FleQ AAA_7
Other DBs
NCBI-ProteinID: WOH70588
LinkDB
Position
4246459..4247829
AA seq 456 aa
MASEILIVDDEADIRDLVAGILEDEGFVTRTARDSDSALAEIANRRPHLVFLDIWLQGSK
LDGLQLLEQVKKDNADLPVVMISGHGNIETAVAAIKRGAYDFIEKPFKADRLILVATRAL
ENSRLKREVKELKQLAPSASQLVGRSPSMNQLRQTIERAAKANSRILIVGPAGAGKELTA
RTLHTASGRADGPFVVINAAAITPERMEHELFGIEQSNGEQARKPGALEEAHGGTLFIDE
IADMPRETQNKILRVLVEQSFQRVGGTAKVQVDVRIISSTARNLEEEIAAGHFREDLYHR
LSVVPIRVPALSERREDIPELIDYFMEQISAGSGLPKRQIGQDAMAVLQSHVWPGNVRQL
RNNVERVMILAAGGPEVIITADMLPQDVGSMVPAMPTSNNGEHIMGLPLREAREVFERDY
LIAQISRFSGNISRTAEFVGMERSALHRKLKALGVG
NT seq 1371 nt   +upstreamnt  +downstreamnt
atggcaagtgaaattctgattgtcgatgatgaggccgatattcgggatctcgttgcgggc
atcctcgaggacgagggcttcgtgacccggaccgcgcgcgacagcgattcggcgctcgcc
gagatcgccaaccgcaggccgcatctggtgttcctcgacatctggctgcagggctccaag
ctcgacggcttgcagctcctggagcaggtcaagaaggacaatgccgacctgccggtggtg
atgatctccgggcacggcaacatcgagaccgcggtcgcggcgatcaagcgcggcgcctac
gacttcatcgagaagccgttcaaggcagaccggctgatcctggtcgcgaccagagcgctg
gagaactcgcggctcaagcgcgaggtcaaggagctcaagcagctcgcacccagcgccagc
cagctcgtcggccgctcgcccagcatgaaccagctgcgtcagaccatcgagcgcgcggcc
aaggccaacagccgcatcctgatcgtcggccccgccggcgccggcaaggagctgaccgcg
cgcacgctgcacacggcctcgggccgtgccgacggtcccttcgtcgtcatcaacgccgcc
gcgatcacgcccgagcgcatggagcacgagctgttcggcatcgagcagtccaatggcgag
caggcacgcaagcccggcgcgctcgaggaagcccatggcggcacgctgttcatcgacgag
atcgccgacatgccgcgcgagacgcagaacaagatcctgcgcgtgctggtggagcaatcg
ttccagcgcgtcggcggcacagccaaggtgcaggtcgatgtgcgaatcatctcctcgacc
gcgcgtaatctcgaagaggaaatcgcggccggccatttccgcgaggatctctatcatcgg
ctctcggtggtgccgatccgggtgcccgcgctgtcggaacggcgcgaggacattccggaa
ttgatcgactacttcatggagcagatttcggccggcagcggcctgcccaagcgccagatc
gggcaggatgcgatggcggtgctccaatcgcatgtctggccgggcaatgtgcgccagctc
cgcaacaacgttgagagagtcatgattctagctgcgggtggccccgaggtcatcattacc
gccgacatgctgccgcaggacgtcggctccatggtgccggcgatgccgaccagcaacaac
ggcgagcacatcatgggcctgccgctgcgcgaagcgcgcgaagtattcgagcgcgactat
ttgattgcacagatcagccgtttttcaggaaatatttctcgaacagccgagttcgttggc
atggaacgttcggcgctgcaccggaagctgaaggcgctcggtgtcggctag

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