Bradyrhizobium sp. NDS-1: RX330_25755
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Entry
RX330_25755 CDS
T11383
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bran Bradyrhizobium sp. NDS-1
Pathway
bran03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bran00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
RX330_25755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bran03400
]
RX330_25755
DNA repair and recombination proteins [BR:
bran03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
RX330_25755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
WOH71677
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All DBs
Position
5511434..5512429
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AA seq
331 aa
AA seq
DB search
MAPRANWKGFLRLSLVTCPVALYPATSDTEKVSFNQINRKTGHRIKYLKVDAETGDEVTS
EDIVKGYKVDTDTYIEVTKDELDDIALDSTHTIDIDEFVPKADIDNRYLIRPYYLVPDGK
VGHDAYAVIRETIRSMDKVAIGRVVLTNREHIIALEPLESGLMGTLLRYPYEVRSEQEYF
DDIQDVKLTKDMLDLARHIVEKKSGAFEPELFEDHYETALIDLINKKRSGMPIAAKATPK
SGGNVINLMDALKKSIANEKDAAPAAKVAKETAKETTKARKPKKRVEGQREMLLPIAGKG
GKDAAAKTAKEAPKKAADKPVRAPARAKKAS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggccccccgcgccaattggaagggttttctgcgtctgtcgctcgtgacctgtccggtc
gcgctctatccggccacttcggataccgagaaggtctccttcaaccagatcaaccgcaag
accggccatcggatcaagtacctcaaggtcgacgccgagaccggtgacgaggtgacttcc
gaggacatcgtcaagggctacaaggtcgacaccgacacctatatcgaggtcaccaaggac
gagctcgacgacatcgcgctcgactcgacccacacgatcgacatcgacgagttcgtgccg
aaggccgacatcgacaaccgctatctgatccgcccctattatctcgtgccggacggcaag
gtcggccacgacgcctatgccgtgatccgcgagaccatccgcagcatggacaaggtcgcg
atcggccgcgtggtgctgaccaaccgcgagcacatcatcgcgctcgagccgctcgagagc
gggctgatgggcacgctgctgcgctatccctacgaggtccgcagcgagcaggaatatttc
gacgacatccaggacgtgaagctgacgaaggacatgctcgacctcgccaggcacatcgtc
gaaaagaagtccggcgcgttcgagcccgagctgttcgaggatcattacgagaccgccctg
atcgatctcatcaacaagaagcgcagcggcatgccgatcgcggccaaggccacgccgaag
agcggcggcaacgtcatcaacttgatggacgcgctgaagaagagcatcgcgaacgagaag
gacgctgcgcctgcggcgaaggtcgccaaggagactgccaaggagaccaccaaggccagg
aagccgaagaagcgcgtcgagggccagcgcgagatgctgctcccgatcgcaggcaagggc
ggcaaggacgctgcggcgaagacggcgaaggaagccccgaaaaaggccgccgacaagccg
gtgcgcgcgccggcgcgggcgaagaaggcgagctga
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