Bradyrhizobium sp. NDS-1: RX330_26980
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Entry
RX330_26980 CDS
T11383
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18306
membrane fusion protein, multidrug efflux system
Organism
bran Bradyrhizobium sp. NDS-1
Pathway
bran02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bran00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RX330_26980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bran02000
]
RX330_26980
Transporters [BR:
bran02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RX330_26980
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
YknX_C
Beta-barrel_RND
Beta-barrel_YknX
RND-MFP_C
Biotin_lipoyl
BSH_CzcB
BSH_CusB
HH_MFP_RND
CzcB_C
BSH_YknX
Beta-barrel_AprE
Beta-barrel_RND_rel
Cadherin-like
Motif
Other DBs
NCBI-ProteinID:
WOH71911
LinkDB
All DBs
Position
complement(5790557..5791750)
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AA seq
397 aa
AA seq
DB search
MNIVTEHKISGEPIDNKAPKRPVRPVLWFVIVGTLLAVLVGGLVWFNYFRGQMIKQFFAN
NKPPPTAVSAAEAKSEVVPNLLTAVGGLVAVHQVDVSADVNGRVTEIKFEPGTRVEAGTP
LVQLFDAPEQGDLANYKAQATVAQLSLDRAKQLAARQFGPQATVDTAQAAYDQAQAGIAK
TEALISQKLVRAPFAGDLGVRKVEVGQYLTAGTAIVSLTDLSALWANFTVTEKDSGSLKV
GQTVRLKVDAYPGRIFEGKITTIEPQIASDTRNIRVQATVANPEKILKPGMFVTTTVVLP
DKPAVITVPETAVDYTLYGDSVFVITEKKEEDGKTSLSAVRTFVQTGSRVEGRVEIVKGL
KAGDKVVAVGQLKLQSGAAVSISTDPVPQIPAQPPRY
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgtaaccgaacacaagatttcgggcgaaccgatcgacaacaaggctcccaag
cgtccggtccggccggtgctatggttcgtcatcgtcggcacgctgctcgccgtgctcgtc
ggcggactcgtctggttcaactatttccgcggccagatgatcaagcagttcttcgccaac
aacaagccgccgccgaccgcggtcagcgcggccgaggcgaagtccgaggtggtgccgaac
ctgctcaccgccgtcggtggcctcgtcgccgtgcatcaggtcgacgtcagcgccgacgtc
aacggccgcgtcacagagatcaagttcgagccgggcacgcgtgtcgaggccggcacgccc
ctggtgcagctgttcgacgcgccggagcagggcgaccttgccaactacaaggcccaggcg
accgttgcgcagctctcgctcgatcgcgccaagcagctcgccgcgcgccagttcggtccg
caggcgaccgtcgataccgcgcaggccgcctatgaccaggcgcaggccggcatcgccaag
accgaggcgctgatctcgcagaagctggtgcgtgcacctttcgccggcgatctcggcgtc
cgcaaggtcgaggtcggccaatatctgacggcaggtacggcgatcgtgtcgctgaccgac
ctttccgcgctgtgggccaacttcaccgtgaccgaaaaggattccggcagcctcaaggtc
ggccagactgtccggctcaaggtcgacgcctatccgggccgcatcttcgagggcaagatc
accacgatcgagccgcagatcgcgagtgacacccgcaatatccgcgtgcaggcgacggtc
gccaatcccgagaagatcctgaagcccggcatgttcgtgaccaccacggtggtgctaccg
gacaagccggccgtgatcaccgtgccggagacggcggtcgactacacgctgtacggcgac
tccgtgttcgtgatcaccgagaagaaggaagaggacggcaagaccagtctctccgcggtg
cgcaccttcgtgcagaccggcagccgggtcgaaggtcgcgtcgaaatcgtcaagggtctg
aaggcgggcgacaaggtcgtcgccgtcggccagctcaagctgcaatcgggcgcggcggtg
tcgatttcgaccgacccggtcccgcagatcccggcgcagccgccgcgctactga
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