Bradyrhizobium sp. NDS-1: RX330_28415
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Entry
RX330_28415 CDS
T11383
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
bran Bradyrhizobium sp. NDS-1
Pathway
bran00740
Riboflavin metabolism
bran00790
Folate biosynthesis
bran01100
Metabolic pathways
bran01110
Biosynthesis of secondary metabolites
bran01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
bran00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
RX330_28415 (ribB)
00790 Folate biosynthesis
RX330_28415 (ribB)
Enzymes [BR:
bran01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
RX330_28415 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
RX330_28415 (ribB)
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Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
WOH72180
LinkDB
All DBs
Position
complement(6094845..6095921)
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AA seq
358 aa
AA seq
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MPDSVQEVLQAFARGELVVVTDDDDREGEGDLIVAASLCTAEKMAFIIRHTSGIVCAPVT
TEDARRLRLDPMVAHNDSAHTTAFTVSIDYKPDGGTGISAEERASCCRALSNPNAGANDF
ARPGHIFPLIAKDGGVLLRSGHTEAAVDLCKLSGLPPVGVISELMNDDGSVMKGEQVARF
AAQHKLKHVTIADMIAYRQAREKLIERVSTFVTESPIGPLQGYAYRSPFDSIAHVAFVYN
GVGDGKNVLTRFHKPNIVKDIFTGHKHMATVLEHFKKSGRGVLVYLRDGAAGVPVAALPD
ESATEADRNRQWREVGVGAQILRDLGVTSIRHLTSSVHDYKGLSGFGIEIVANEQLES
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatagcgtccaggaagtcttgcaggcctttgcccggggtgagctcgtggtcgtc
accgacgacgacgaccgcgagggcgagggcgatctgatcgtcgccgcctcgctctgcacc
gccgagaagatggcgttcatcatccgccacacctccggcatcgtctgcgcgcccgtgact
accgaggacgcgcgccgcctacggctcgatccgatggtggcccataacgattccgctcac
accactgcgttcacggtgtcgatcgactacaagcccgatggcggcaccggcatctccgcc
gaggagcgcgcctcttgctgccgcgcgctctccaatcccaatgccggcgccaacgatttt
gcccggcccggccacatctttccgctgatcgccaaggacggcggcgtgctgcttcgctcc
ggccataccgaggcggccgtcgatctctgcaagctctccgggctgccgccggtcggcgtc
atcagcgagctgatgaacgacgacggcagcgtgatgaaaggcgagcaggttgcccgcttc
gccgcccagcacaagctcaagcatgtcaccatcgcggacatgatcgcctaccgccaggcg
cgcgaaaagttgatcgagcgggtctcgaccttcgtcaccgaaagcccgattggccccttg
caaggctatgcctatcggtcgccgttcgattccatcgcccacgtcgctttcgtctataac
ggcgtcggcgacggcaagaacgtgctgacccgctttcacaagccgaacatcgtcaaggac
atcttcaccgggcacaagcacatggcgaccgtgctcgagcatttcaagaaatccggccgt
ggggtgctggtttacttgcgcgacggcgctgccggcgttcccgtggcggcgctgccggac
gagtcggcgacggaagccgaccgcaaccgccagtggcgcgaagtcggcgtcggcgcgcag
atcttgcgcgacctcggcgtcacctcgatccggcatctcacctcctcggtgcacgactac
aaaggcttgtcgggcttcggcatcgagatcgtcgccaacgagcagcttgaaagctag
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