Bradyrhizobium sp. NDS-1: RX330_32495
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Entry
RX330_32495 CDS
T11383
Symbol
pimA
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bran Bradyrhizobium sp. NDS-1
Pathway
bran00061
Fatty acid biosynthesis
bran00071
Fatty acid degradation
bran01100
Metabolic pathways
bran01212
Fatty acid metabolism
bran02024
Quorum sensing
bran04146
Peroxisome
Module
bran_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bran00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RX330_32495 (pimA)
00071 Fatty acid degradation
RX330_32495 (pimA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RX330_32495 (pimA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
RX330_32495 (pimA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bran01004
]
RX330_32495 (pimA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bran04147
]
RX330_32495 (pimA)
Enzymes [BR:
bran01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RX330_32495 (pimA)
Lipid biosynthesis proteins [BR:
bran01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RX330_32495 (pimA)
Exosome [BR:
bran04147
]
Exosomal proteins
Exosomal proteins of breast milk
RX330_32495 (pimA)
Exosomal proteins of breast cancer cells
RX330_32495 (pimA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WOH77125
LinkDB
All DBs
Position
complement(6962127..6963785)
Genome browser
AA seq
552 aa
AA seq
DB search
MTHPGEQFYPEGVRWDDTIAQGTLPDLLSNAASDYGPRIALEFRDRPITYTELVAQAERA
AAAFLREGIGKNASVALFLGNTPDHPVNFFGALKAGARIAHLSPLDGEIALTHKVSDSGS
RLLVTSNLQTLLPTALKFLEKGLIDRLVVCEDDDWGKVGTPQAAIPNDPRIITFKAFVEG
ATAPAQWPNVTADDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRAARGDVV
ERVICVLPLFHIYALTVVLLSSLSRGNLISLHQRFDVEAVMRDIEAKRATYFPGVPTMWI
AIAALPDLDKRDFSSLASIGSGGAPLPVEIANFFERKVGKKLRSGWGMTETCSPGTGHPP
TGPDKPGSIGLMLPGIELDVVALDDPKRVLPPGEVGEIRIKGPNVTKGYWNKPEGSAEAF
VDGRFLTGDIGYVDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYTIPGVHEVIVLGIP
DPYRGEAAKAFIKLRPDAKPFSLDELRAQLAGKLGKHELPAAAEFVDDLPRTPVGKLSRH
ELRQRQKPAQSA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgacccatcccggcgaacaattttatcccgaaggcgtgcgttgggacgataccatcgcg
cagggcacgcttccggatcttttgtcgaacgcagcgtccgactacggcccgcgcattgcg
ctcgaattccgggatcgtcccatcacctacaccgagctcgtagctcaggccgagcgggcc
gccgcggcgttcctgcgcgaaggcatcggcaagaacgcctccgtcgcgctattcctcggc
aacacgccggatcaccccgtcaacttcttcggcgcgctgaaggcgggcgcccgcatagcg
catctgtcgccgctcgacggcgagatcgcgctgacgcacaaggtttccgattcgggatcg
cgtctgctcgtcacctcgaaccttcagacgctgctgccgacggcgctgaaattcctggag
aagggcctgatcgaccgcctcgtcgtttgcgaggacgacgattggggcaaggtcggcacg
ccgcaggcggcgattccgaatgatccccgcatcatcaccttcaaggcttttgtggagggt
gcgaccgcgccggcacaatggccgaacgtgacggccgacgacgtcgcgctgctgcaatat
accggcggcaccaccggcctgcccaagggcgcgatgctgacgcacggcaatctcacctcc
gccgtgtcgatctacgacgtctggggcaagccgtcgcgcgctgcgcgcggcgacgtcgtc
gagcgcgtgatctgcgtgctcccgctgttccacatctatgcgctcaccgtggtgctgctc
tcctcgctcagccgcggcaatctgatctcgctgcatcagcgtttcgacgtcgaagcggtc
atgcgcgacatcgaggccaaacgcgcgacgtactttcccggcgtgccgacgatgtggatc
gcgatcgccgcgctgcctgatctcgacaagcgcgatttctcctcgctcgccagcatcggc
tccggcggcgcgccgctgccggtggaaatcgcgaacttcttcgagcgcaaggtcggcaag
aagctgcgcagcggctggggcatgaccgagacctgctcgcccggcaccggccatccgccc
accggtcccgacaagccgggctcgatcggcctgatgctgcccggcatcgagctcgatgtg
gtcgcgctcgacgatcccaagcgcgtgttgccacccggcgaagtcggcgagatccgcatc
aagggccccaacgtcaccaaggggtattggaacaagccggaggggtcggccgaggccttc
gtcgatggccgcttcctcaccggcgacatcggctatgtcgacaccgacggctacttcttc
ctggtcgatcgcaagaaggacatgatcatctccggcggcttcaacgtctatccgcagatg
atcgagcaggcgatctacaccatcccaggggtgcacgaggtgatcgtgctcggcattccc
gacccctatcgcggcgaggccgcaaaggccttcatcaagctgcggccggacgcaaaaccg
ttctcgctcgacgagctgcgcgcgcagctggccggcaagctcggcaagcatgaattgccg
gccgcggccgaattcgtcgacgacctgccgcgtacgccggtcggaaaattgtcgcgccac
gaattgcgccagcggcagaaaccagcacaatccgcatag
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