Bradyrhizobium zaerense RDM4: ACKN7S_08550
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Entry
ACKN7S_08550 CDS
T11586
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
brar Bradyrhizobium zaerense RDM4
Brite
KEGG Orthology (KO) [BR:
brar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brar03009
]
ACKN7S_08550
Enzymes [BR:
brar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
ACKN7S_08550
Ribosome biogenesis [BR:
brar03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
ACKN7S_08550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_25
Methyltransf_31
Methyltransf_23
Methyltransf_11
FtsJ
MTS
Methyltransf_12
RsmF-B_ferredox
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
XLS17212
LinkDB
All DBs
Position
1633422..1634768
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AA seq
448 aa
AA seq
DB search
MPSQRFAPPSEVPGLAARRIAADIVDGVLHKHRTLDDQLDGTGAHPGLKTLADRDRALMR
RLVATILRRLGTLGHVLSRLLEKGIPSDAPRAQSALLIGAAQILWMDVPDHAAVDLAVRL
VQSDRRAARYAGLVNAVLRRCAREGKALVEEVAAQSLDLPPWLLARWSAHYGETVAREMA
LALGHEPSLDLTVKSDAAQWASRLHGEMLPTGSVRTVLHGAVTMLPGFTEGQWWVQDAAA
ALPARLFGDIKGKSIADLCAAPGGKTAQLAHAGAHVTAIDRSPARVGRLRENLARLSLQA
ETVVADAVEWAGPADGFDGILIDAPCTSTGTIRRHPDVCWLRQESDIAAMTTLQQRLLRK
SISLLKPGGTLVYCTCSLEPEEGEHAIAALLAAEPGLRRVPIEASEVSGLSEIITADGDL
RTLPSHLPHADPKLGGLDGFFAARLVKS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgccatctcaacgtttcgcccctccatccgaagtgcccggtctcgcggcgcggcggatc
gctgccgacatcgtcgacggcgttctgcacaagcaccgcacgcttgacgatcagctcgac
ggcaccggcgcccaccccggattaaagacgctcgccgaccgcgaccgtgcgctgatgcgg
cgcctggttgcgaccatcctgcgccggctcggcacactcggccatgtgctgtcgcgcctg
ctcgaaaagggcatcccgtccgatgcgccgcgcgcccagagcgcgctgctgatcggcgcc
gcccagatcctgtggatggacgtgcccgatcacgccgccgtcgatctcgcggtgcgcctg
gtgcagtccgaccggcgtgccgcgcgctatgccggcctcgtcaacgccgtgctgcgccgc
tgcgcgcgcgagggcaaggcgctggtcgaggaagtcgccgcgcaatcgctcgacctgccg
ccttggctgctcgcgcgctggagcgcgcattacggcgagactgtcgcaagggagatggcg
ctcgcgctcggccacgagccgtcgctcgatctcaccgtcaagtccgacgccgcgcaatgg
gcgagccggctgcacggcgaaatgctgccgaccggatcggtgcgtacggtgctgcacggc
gcggtgaccatgctgcctggcttcactgagggacaatggtgggtgcaggatgccgccgca
gcgctgccagcccggttgttcggcgacatcaagggcaagtccattgccgatctctgcgcc
gcgcccggcggcaagaccgcgcaactggcccacgccggcgcgcatgtcacggcgatcgac
cgttcgccggcccgggtggggcgcctgcgcgaaaatctggcgcgattgtcgctccaggcc
gagactgtcgtcgccgacgccgtggaatgggccggtcccgcggatggatttgacggtatc
ctgatcgacgcgccctgcacctcgaccgggacgatccgccgtcaccccgacgtgtgctgg
ctccggcaggaatccgacatcgccgcgatgaccacgctgcagcagcggctgctgcgcaaa
tccatctcgctgctcaagcccggcggcacgctggtctactgcacctgctcgctggaaccc
gaagagggcgagcacgccatcgccgcgctgctggccgcagagcctgggctgcgccgcgtg
ccgatcgaagcctccgaggtctccgggctcagcgagatcatcaccgccgacggtgatctt
cggaccctgccgagccatttgccgcacgccgacccgaagctcggcgggctcgacggattt
tttgcggcccggctcgttaaatcctga
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