Bradyrhizobium sp. RDM4: ACKN7S_16320
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Entry
ACKN7S_16320 CDS
T11586
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
brar Bradyrhizobium sp. RDM4
Pathway
brar03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
brar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ACKN7S_16320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brar03400
]
ACKN7S_16320
DNA repair and recombination proteins [BR:
brar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ACKN7S_16320
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GFIT
Motif
Pfam:
Ku
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
XLS18502
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All DBs
Position
complement(3255342..3256223)
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AA seq
293 aa
AA seq
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MAPRAYWKGTLKLSLVSCPVVLYPAATAAEKTRFHLINRETGNRLKQQMVDSETGDIVES
EQKGRGYELRKGKYVEIEPEELEAVQIESNHTIDIESFVPSEEIDQRYLNHPYYIAPDGK
AAVDAFAVIRDAMKDQDRVALAKIVLTNREHVMAIEPLGKGLLGTTLRYPYELRDEDQFF
DDIKSPKITRDMVDLAGHILHTKAAHFDPGKFKDEYEDALKALVKRKASGKKIELPEPEE
RPSNVVSLMDALKQSLKGRGGGKSAKSHARRATGRRRTAKKTHRSTARHRKAG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctccccgcgcctattggaaagggacgctgaagctctcgctggtgagctgccccgtc
gtgctctacccggccgccaccgcggccgagaagacccggtttcacctgatcaaccgcgag
accgggaaccggttgaagcagcagatggtcgattccgagaccggcgacatcgtcgagagc
gagcagaaggggcgcggctacgagctgcgcaagggcaaatatgtcgagatcgagccggag
gagctcgaggcggtccagatcgagagcaaccacaccatcgatatcgagagctttgtgccg
agcgaggagatcgaccagcgctacctcaaccatccctattacatcgcgcccgacggcaag
gccgcggttgacgcctttgccgtgatccgcgacgccatgaaggatcaggaccgcgtcgcg
ctcgccaagatcgtgctcaccaaccgcgagcatgtcatggcaatcgaaccgctcggcaag
ggcctgctcggtaccacgctgcgctatccctacgagctgcgcgacgaggaccagttcttc
gacgacatcaagagcccgaagatcaccagggacatggtcgatctcgccggccacatcctc
cacaccaaggccgcgcatttcgaccccggcaaattcaaggacgagtacgaggatgcgctg
aaggcgctggtgaagcgcaaggcgagcggcaagaagatcgagcttcccgagcccgaggag
cggccgagcaacgtcgtcagcctgatggacgccctgaagcagagcctgaaggggcgcggc
ggcggaaagtccgccaagtcccacgcgcgccgcgcgaccgggcggcgacgaactgcgaag
aagacgcaccgttcgacggcgcggcaccgcaaggcgggttga
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