Bradyrhizobium sp. RDM4: ACKN7S_25295
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Entry
ACKN7S_25295 CDS
T11586
Name
(GenBank) serine hydrolase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
brar Bradyrhizobium sp. RDM4
Pathway
brar00550
Peptidoglycan biosynthesis
brar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACKN7S_25295
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brar01002
]
ACKN7S_25295
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
brar01011
]
ACKN7S_25295
Enzymes [BR:
brar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ACKN7S_25295
Peptidases and inhibitors [BR:
brar01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
ACKN7S_25295
Peptidoglycan biosynthesis and degradation proteins [BR:
brar01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
ACKN7S_25295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Cuticle_1
Motif
Other DBs
NCBI-ProteinID:
XLS13485
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Position
complement(5125995..5127791)
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AA seq
598 aa
AA seq
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MLRNNWSSSRLARVGIFGLLTVTTAVIFTTDAADARRFRRHYAHHRVHHGDSESYSPQFA
SIIVDGNSGAVLQSTNPDALRHPASLTKIMTLYLLFERLESGKMKLDTEMPVSQRAADQD
PTKLNLRAGQTIRVEDAIKGLVTRSANDAAVVIAEAIGGDEDDFAAMMTRKARALGMSKT
IYRNANGLPNDEQVTTARDQATLGRAIQERFPRYYRYFSTTSFTWRGESIRNHNHLLGSV
EGVDGIKTGYTRASGFNLVTSMRRGNRHLIGVVLGGRSGGSRDAIMRNLLAENLEKGATT
HTVVAVTERSGADASTDVADASDTPARLAPQVQATAAPEAPAPRPASRLSALAAAATAAM
PPAQPKPEAKSTESRIEPAPLTNGVISSQPLSLIPGSSEPMKPVRVKTVQVKAGTVKVAS
AAPTQVAPQVTNTITPRNDVAETSGAVVAKADIANKPEPARAEAARAELPEQPAGFGTGN
GILGVLPAAPAAAKLASADPAPLPVQMSAPTRPVVTHSGWIVQVGALESENEAQQRIDAA
RSSARGLLSRADPFTEPVVAKDNRKLYRARFAGLERDQAEAVCRALKRAEISCMTVRN
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtaacaactggtcttcctcgcgcttggcgcgggttggcatcttcggacttctc
acggtcaccacagccgtgatcttcacgaccgatgccgcggacgcacggcgcttccggcgc
cactacgcgcaccaccgggtgcatcacggtgattccgagagctatagcccgcaattcgcg
tcgatcatcgtcgatggcaattccggcgcggtgctccagtcgaccaaccccgacgcgctg
cgccatcccgcctcgctcaccaagatcatgacgctctatttgctgttcgagcgtctcgag
tccggcaagatgaaactggacaccgagatgccggtgtcgcagcgcgccgccgaccaggat
ccgaccaagctcaatctgcgtgcgggccagaccatccgcgtcgaggacgcgatcaagggt
ctcgtcacccgctccgccaacgacgccgcggtggtgatcgcggaagcgatcggcggcgac
gaggatgacttcgccgcgatgatgacgcgcaaggcgcgcgcgctcggcatgtccaagacg
atctaccgcaacgccaacggcctgcccaacgacgagcaggtcactaccgcgcgcgaccag
gccacgctcggccgcgccatccaggaacgcttcccgcgttactaccgctatttctcgacc
acctcattcacttggcgcggcgagtcgatccgcaaccacaatcacctgctcggcagcgtc
gagggcgtggacggcatcaagaccggctacacccgcgcctctggcttcaacctcgtgacc
tcgatgcgccgcggcaaccgccacctcatcggggtcgtgctcggcgggcgcagcggcggt
tcgcgcgacgccatcatgcgcaatttgctcgcggagaatctcgagaagggcgcgaccact
cacacggtcgtggcggtcaccgagcgcagcggcgccgacgccagcaccgatgtcgccgac
gcctccgacaccccggcccgcctcgctccgcaggttcaggccacggccgcacccgaggca
cccgcgcctcgtccggcctcgcgcctgtcggcgctggcagccgccgcaaccgccgcgatg
ccgccggcccagcccaagcctgaggccaagtccaccgaatccaggatcgagcccgcgccg
ctcaccaatggcgtgatctcgagccagccgctgtcgctcattccgggatcgtccgagccg
atgaagccggtccgggtcaagacggtccaggtcaaggccggcaccgtgaaggtcgcgtcc
gctgctccgacacaagtcgcgccgcaggtcactaacacgattacgcctcgcaacgacgtc
gcggagacctccggcgcggtcgtcgccaaggccgatatcgccaacaagccagagccagct
agagccgaggctgcccgcgctgaattgcctgagcagccggcgggcttcggcaccggcaac
ggcatcctgggcgtcttgccggccgctcccgcggccgccaagctcgcctcggccgatccg
gcgccgctgccggtccagatgagcgccccgaccaggccggtcgtcacccacagcggttgg
atcgtccaggttggcgcgctcgaaagcgagaacgaagcccagcagcgcatcgacgcagcg
cgcagctcggcccgtggattgctcagcagggcagatccgttcaccgagccggtcgtggcc
aaggacaatcgcaagctctatcgcgcccgcttcgccgggctggagcgggatcaggccgag
gccgtatgccgcgccctgaagcgcgccgagatctcctgcatgaccgtgcgcaactga
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