Bradyrhizobium sp. RDM4: ACKN7S_28340
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Entry
ACKN7S_28340 CDS
T11586
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase family protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
brar Bradyrhizobium sp. RDM4
Pathway
brar00550
Peptidoglycan biosynthesis
brar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACKN7S_28340
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brar01002
]
ACKN7S_28340
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
brar01011
]
ACKN7S_28340
Enzymes [BR:
brar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ACKN7S_28340
Peptidases and inhibitors [BR:
brar01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
ACKN7S_28340
Peptidoglycan biosynthesis and degradation proteins [BR:
brar01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
ACKN7S_28340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
XLS13979
LinkDB
All DBs
Position
complement(5717037..5718299)
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AA seq
420 aa
AA seq
DB search
MAFRLTSLRLTRFTAGALMRGLVAGVLVASVGWSGVLYAANQSVQGAKKTEDAGFDGDAP
TAILIEASSGSVLFEKNADELRAPSSMMKLVTAEVVFNAIRKGDVKLTDEYRISENAWRK
GGAPSGGSTMFAAINSKVSVDDLLHGAIIQSGNDACIALAEGIAGSERIFAADFMTKRAR
ELGLNKSTFANSNGLPDPGNKMTVRELGILARHIILDFPEFYKLFGEKEFTWNKIRQPNR
NPLLNSMEGADGLKTGYTKEGGYGMVGSAVQNGTRLIVVVNGLEDPEDRATEAKKMLEWG
FRNFETRTLIAADQPVGYAKVFGGESRSVKLVAKTPVKVMVHKSGGDKLIARVVYSGPVR
APVEAGQQVGVVRVWRGGNIAVETPVYAADAIGTGSTVRRAIDGASELAIGMFRAGAEKL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcatttcgtctcacttcgctgcgtctcacccggttcacggccggagcgttgatgcgc
ggactcgttgccggggtgctggtcgcaagcgtcggttggagcggggtgctctatgccgcc
aaccagagcgtccagggcgccaagaagaccgaagacgccggctttgacggcgacgcccct
accgcgatcctgatcgaggcctccagcggcagcgtcctgttcgagaaaaacgccgacgag
ctgcgcgcgccctccagcatgatgaagctcgtgaccgcggaagtcgtgttcaatgcgatc
aggaagggcgacgtcaagctgacggacgaataccggatcagcgagaatgcctggcgcaag
ggcggcgccccgtccggcggctcgaccatgttcgcggccatcaatagcaaggtctcggtc
gacgacctcctgcacggcgcgatcatccagagcggtaacgatgcctgcatcgcgcttgcc
gaaggcatcgccggcagcgagcggattttcgctgccgatttcatgaccaagcgcgcccgc
gaactcggcttgaacaagtcgaccttcgccaactccaacggcttgcctgaccccggcaac
aagatgacggtgcgcgagctcggcattctcgcgcgtcacatcatcctggacttccccgaa
ttctacaaactgttcggcgagaaggagttcacctggaacaagatccgccagcccaaccgc
aatccactgctcaattcgatggaaggcgccgatggtctcaagaccggctacaccaaggaa
ggcggctacggcatggtcggctcggctgtgcaaaacggcacgcggctgatcgtcgtcgtc
aacgggttggaagacccggaggaccgcgccacggaagccaagaagatgctggaatggggc
tttcgcaatttcgagacccgcacgctgatcgccgccgaccaaccggtcggctacgccaag
gtgttcgggggcgagagccgatcggtgaagctggttgccaagacgccggtgaaggtgatg
gtgcacaagagcggcggcgacaagctgattgcgcgcgtcgtctatagcggtccggtgcgc
gcgccggtcgaggccggccagcaggtcggcgtggtgcgggtctggcgcggcggtaacatc
gcggtggagacgccagtctatgcggctgatgcgatcggcaccggctcgaccgtccgccgt
gcgatcgacggcgccagcgagctcgcgatcggcatgttccgcgcaggcgccgagaagctc
tga
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