Bradyrhizobium sp. RDM4: ACKN7S_30175
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Entry
ACKN7S_30175 CDS
T11586
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
brar Bradyrhizobium sp. RDM4
Pathway
brar00450
Selenocompound metabolism
brar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brar00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
ACKN7S_30175
Enzymes [BR:
brar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
ACKN7S_30175
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
ACKN7S_30175
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
XLS14298
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Position
complement(6064900..6066147)
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AA seq
415 aa
AA seq
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MSTHPAVKNGAYNVARVRQDFPALAMQVYGKPLVYLDNAASAQKPQVVLDRMTQAYTSEY
ANVHRGLHYLANAATEAYEGGRIKVAQFINAPRPEEVIFTRNATEAINLIASSWGEPNIK
AGDEIVISIMEHHSNIVPWHFLRERHGAVIKWAPVDDEGNFLIDEFEKLLTAKTKLVAIT
QMSNALGTIVPVKDVVKIAHARGIPVLVDGSQGAVHLPVDVHDIGCDFYVFTGHKVYGPT
GIGVLWAKYDHLVAMRPYNGGGEMIREVSREIVTYGDPPHKFEAGTPAIVEAVGIGAAID
YVNSIGKERIAAHEHDLVTYAQGRLREINSLRLIGTARGKGPVISFELKGAHAHDVATVI
DRQGIAVRAGTHCVMPLLERFNVTATCRASFGMYNTREEVDHLAQALLKAQDLFA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcatccggcagtcaagaacggcgcctataacgtcgcccgcgtgcgccaggat
ttcccggcgctggcgatgcaggtctacggcaagccgctggtctatctcgacaacgccgcc
tccgcgcagaagccgcaagtcgtgctcgatcgcatgacgcaggcctatacgagcgaatac
gccaacgtgcatcgtggcctgcactatcttgccaacgctgcgaccgaagcctatgagggc
ggccgcatcaaggtcgcgcagttcatcaacgctccgcgacctgaggaagtgatcttcacc
cgcaacgccactgaagcgatcaacctgatcgcgtcgtcctggggcgagccgaacatcaag
gcgggcgacgagatcgtcatctcgatcatggagcaccactccaacatcgtgccctggcat
ttcctcagggagcgtcatggcgcggtgatcaaatgggcgccggtcgatgacgagggcaac
ttcctgatcgacgaattcgagaagctgttgaccgcgaagaccaagctggtcgcgatcacg
cagatgtcgaacgcgctcggcaccatcgtcccggtcaaggacgtcgtaaaaatcgcgcat
gcccgcggcattccggtgctggtcgacggcagccagggcgcggtgcatctgcccgtcgac
gtccatgacatcggctgcgatttttatgtcttcaccgggcacaaggtttacgggccgacc
ggcatcggtgtgctctgggccaagtacgatcacctcgtcgcgatgcgtccttacaacggc
ggcggcgagatgatccgcgaggtctcgcgcgagatcgtcacctacggcgatcccccgcac
aaattcgaggccggcacgccggccatcgtcgaggccgtcggcatcggcgccgccatcgat
tacgtcaattcgatcggcaaggagcgcatcgccgcgcacgagcacgatctcgtcacctat
gcccagggccgcctgcgcgagatcaactcgctgcgcctgatcggcaccgcccgtggcaag
ggtccggtgatctcgttcgagctcaagggcgcgcacgcccacgacgtcgccaccgtgatc
gaccgccagggcatagcggtgcgcgccggcacccattgcgtgatgccgcttttagagcgg
ttcaacgtcacagccacatgccgggcgtcgttcggcatgtataatacgcgggaagaagtc
gatcatctggctcaggcgctgttgaaggcgcaggatttgttcgcatga
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