KEGG   Bradyrhizobium sp. 62B: ML401_00970
Entry
ML401_00970       CDS       T10244                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bray  Bradyrhizobium sp. 62B
Pathway
bray00010  Glycolysis / Gluconeogenesis
bray00020  Citrate cycle (TCA cycle)
bray00260  Glycine, serine and threonine metabolism
bray00280  Valine, leucine and isoleucine degradation
bray00310  Lysine degradation
bray00380  Tryptophan metabolism
bray00620  Pyruvate metabolism
bray00630  Glyoxylate and dicarboxylate metabolism
bray00640  Propanoate metabolism
bray00670  One carbon pool by folate
bray00785  Lipoic acid metabolism
bray01100  Metabolic pathways
bray01110  Biosynthesis of secondary metabolites
bray01120  Microbial metabolism in diverse environments
bray01200  Carbon metabolism
bray01210  2-Oxocarboxylic acid metabolism
bray01240  Biosynthesis of cofactors
Module
bray_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bray_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bray_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bray_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bray00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    ML401_00970 (lpdA)
   00020 Citrate cycle (TCA cycle)
    ML401_00970 (lpdA)
   00620 Pyruvate metabolism
    ML401_00970 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    ML401_00970 (lpdA)
   00640 Propanoate metabolism
    ML401_00970 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    ML401_00970 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    ML401_00970 (lpdA)
   00310 Lysine degradation
    ML401_00970 (lpdA)
   00380 Tryptophan metabolism
    ML401_00970 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    ML401_00970 (lpdA)
   00670 One carbon pool by folate
    ML401_00970 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bray04147]
    ML401_00970 (lpdA)
Enzymes [BR:bray01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     ML401_00970 (lpdA)
Exosome [BR:bray04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   ML401_00970 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 NAD_binding_8 FAD_oxidored GIDA FAD_binding_2 FAD_binding_3 AlaDh_PNT_C HI0933_like Thi4 DAO 3HCDH_N Lycopene_cycl
Other DBs
NCBI-ProteinID: WIW46723
LinkDB
Position
405216..406616
AA seq 466 aa
MATYDLVVIGTGPGGYVCAVRASQLGMKVAVVEKNATLGGTCLNVGCMPSKALLHASEMF
EEAGHSFAKMGVSVSAPKLDLPAMMNFKQQGIDGNVKGVEFLMKKNKIDVLKGTGKILGT
GKVEVSADGKSQVVETKNIVIATGSDIARLKGIEIDEKRIVSSTGALSLDKVPGKLLIVG
AGVIGLELGSVWHRLGAEVVVVEFLDRILPGMDGEIAKQFQRILEKQGFAFKLGAKVTGV
DTSGKSLKATIEPAAGGAAETLDADVVLVCIGRVPYTDALGLKEAGVALDARGRVQIDPH
FATSLKGVYAIGDVVAGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTTPEVSSV
GKTEEELKQAGTAYTVGKFPFTANGRSKVNQTTDGFVKILADAKTDRVLGVHIIGREAGE
MIHEAAVLMEFGGSAEDLARTCHAHPTRSEAIKEAALAVGKRAIHM
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggctacctacgatctcgtcgtcatcggcaccggacctggcggttatgtctgcgcggtg
cgcgccagccagctcggcatgaaagtcgccgtggtcgaaaagaacgccaccctcggaggc
acctgcctcaatgtcggctgcatgccgtcgaaggcgctgctgcacgcgtcggaaatgttc
gaggaagccggccactccttcgccaagatgggcgtcagcgtttccgcgccgaagctcgat
ctgcccgcgatgatgaacttcaagcagcagggcatcgacggcaacgtcaagggcgtcgag
ttcctgatgaagaagaacaagatcgacgtgctcaagggcaccggcaagatcctgggcacc
ggcaaggtcgaagtctccgccgacggcaagtcgcaggtggtcgagaccaagaacatcgtg
atcgccaccggctcggacatcgcgcgcctcaaaggcatcgagatcgacgagaagcgcatc
gtgtcctcgaccggcgcgctgtcgctggacaaggtccccggcaagctcctgatcgtcggc
gccggcgtgatcggcctcgagctcggctcggtgtggcaccgtctcggcgccgaagtcgtc
gtcgtcgaattcttggaccgcatcctgcccggcatggacggcgagatcgccaagcaattc
cagcgcatcctcgagaagcagggctttgcgttcaagctcggcgccaaggtcaccggcgtc
gacacctccggcaagtcgctgaaggcgacgatcgagccggccgccggcggcgccgccgag
acgctggacgccgatgtcgtgctcgtctgcatcggccgcgtgccctacaccgacgcgctc
gggctgaaggaagccggcgtcgcgctcgacgcgcgcgggcgggtgcagatcgatccgcat
ttcgccaccagccttaagggcgtctatgccatcggcgacgtcgtcgctgggcccatgctg
gcgcacaaggccgaggatgaaggcgttgcggtcgccgagatcatcgccggccaggccggc
cacgtgaattacgatgtgattccgggcgtcgtgtataccacgccggaagtgtcctccgtc
ggcaagaccgaggaggagctgaagcaggcgggcaccgcctataccgtcggaaagtttccg
ttcaccgccaacggccgctccaaggtgaatcagaccactgacggcttcgtgaagattctc
gcagatgcgaagaccgatcgcgtgctcggcgtgcacattatcggccgcgaggccggcgaa
atgatccacgaggcggccgttctcatggagtttggcggcagcgcggaagatctcgcgcgc
acctgtcacgcccatccgacccggtcggaggccatcaaggaagccgcgcttgcagtcggc
aagcgggccatccatatgtag

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