Bradyrhizobium sp. 62B: ML401_04965
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Entry
ML401_04965 CDS
T10244
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
bray Bradyrhizobium sp. 62B
Pathway
bray03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bray00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ML401_04965 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bray03400
]
ML401_04965 (uvrB)
DNA repair and recombination proteins [BR:
bray03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ML401_04965 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ML401_04965 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Kinesin
Microtub_bd
nSTAND_NTPase5
DUF2963
SWI2_SNF2
DUF87
Motif
Other DBs
NCBI-ProteinID:
WIW47475
LinkDB
All DBs
Position
complement(1248240..1251206)
Genome browser
AA seq
988 aa
AA seq
DB search
MAKKPASSEKSGKSPKTKTPNSKAHRPDVQPIGPALAELLNPAINRGDAGLGSGTGLQPP
PDNSRDRRSGGEAAAHRARASTPKEFPQDAARPMPLRPNPQPPGARASTEGFDEAPQANY
GTAATIPTLDPELARQLGLPTEEDDAEALARPPRSKMEALGVKATADALESLIREGRPEF
RKNDGSTKVWTPHRPPRPEKSEGGVRFEIKSHYQPKGDQPTAIAELVEGVQRNDRTQVLL
GVTGSGKTYTMAQVIEKTQRPALILAPNKTLAAQLYGEFKNFFPDNAVEYFVSYYDYYQP
EAYVPRTDTYIEKDSSINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYTAMT
FALKKGERIDQRQLIADLVALQYKRTQADFTRGTFRVRGDVIDIFPAHYEDRAWRVNLFG
DTIETIEEFDPLTGHKQDELEFIKMYANSHYVTPRPTLVQAIKSIKSELKQRLDQLNNQG
RLLEAQRLEQRTTFDLEMMEATGSCAGIENYSRYLTGRRPGEPPPTLFEYVPDNALIFAD
ESHVTIPQIGAMFRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDMMRPQTVAVSATPSG
WELNESGGVFVEQVIRPTGLIDPPVDIRPARTQVDDLVGEVRATAQAGYRSLITVLTKRM
AEDLTEYLHEQGIRVRYMHSDIDTIERIEIIRDLRLGAFDALVGINLLREGLDIPECALV
AILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADQMTGSMERAIAETNRRREKQVEY
NTANGITPESVKKQIGDILNSVYERDHVLVEVGGHDMTDDVISIGHNFEAVLGDLETRMR
EAAADLNFEEAARLRDEVKRLRATELAVVDDPTAKQRAVTGKAGAYAGTRKYGDSANLPV
SAMKNKSAATALKAGGGKGSRVHKPHLDEMHGPESLPYREGRALPSKPFGGESRIIQPTD
SRQSGPEFGPAPKSTGGMPGRRGGWKKR
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaacctgcatcctccgaaaaatccggcaaatcccccaagaccaagaccccg
aactcgaaggcgcaccgccctgacgtgcagccgatcgggccggcgctggccgaattgctc
aatcccgcgatcaaccgcggcgatgccgggctgggatccggcaccgggctgcagccgccg
ccggataattcgcgcgaccggcgatccgggggcgaggccgccgcgcatcgcgcgcgggct
tcgacgccgaaggagtttccgcaggatgcggcgcgcccgatgccgctgcggcccaatccg
cagccgccaggcgcccgggcgtcgaccgagggtttcgacgaggcgccgcaggccaattac
ggcaccgcggccacgatcccgacgctcgatccggaactggcgcggcagcttggcctgccg
accgaggaggacgatgccgaggcgctggcgcggccgccgcgcagcaagatggaagcgctc
ggcgtcaaggcgaccgccgatgcgctggaatcgctgatccgcgagggccggcctgagttc
cgcaagaacgacggctccaccaaggtgtggacgccgcaccggccgccgcgcccggaaaag
tccgaaggcggcgtgcgcttcgagatcaagtcgcactatcagcccaagggcgaccagccc
accgcgatcgcggaactggtcgaaggcgtccagcgcaacgaccgcacccaggtgctgctc
ggcgtcaccggctcgggcaagacctacaccatggcgcaggtgatcgagaagacgcagcgc
ccggcgctgatcctggcgccgaacaagacgctcgccgcccagctctacggcgagttcaag
aacttcttccctgacaacgcggtcgagtattttgtcagctattacgactactatcagcca
gaggcgtatgtccctcgcacggacacctacatagaaaaggactcatcgatcaacgagcag
atcgaccgcatgcgccactcggcgacgcgcgcgctgctcgaacgcgacgacgtcatcatc
gtcgcctcggtgtcctgcatctacggtatcggctcggtcgagacctacaccgcgatgacc
ttcgcgctgaagaagggcgagcgcatcgaccagcgccagctcatcgccgacctcgtcgcg
ctgcaatacaagcgcacccaggccgatttcacccgcggcaccttccgtgtccggggcgac
gtcatcgacatcttcccggcgcactatgaggaccgcgcctggcgggtgaatttgttcggc
gacaccatcgagaccatcgaggaattcgatccgctcaccggccacaagcaggacgagctc
gaattcatcaagatgtacgccaattcgcactatgtgacgccgcgcccgacgctggtgcag
gcgatcaagtcgatcaaatcagagctgaagcagcggctcgaccagctcaacaaccagggc
cgcctcttggaagcgcagcggctggagcagcgtaccaccttcgacctcgagatgatggag
gcgacgggaagctgcgccggcatcgaaaactattcgcgctacctcaccgggcgccgcccc
ggcgagccgccgccgacgctgttcgaatacgtgcccgacaacgcgctgatcttcgccgac
gaaagccacgtcaccatcccgcagatcggcgccatgttccgcggcgacttccgccgcaag
gcgacgctggccgagtatggcttccgcctgccctcctgcatggacaatcgcccgctccgc
ttcgaggagtgggacatgatgcggcctcagaccgtcgcggtgtcggcgacgccgagcggc
tgggaactgaacgagagcggcggcgtattcgtcgagcaggtcatccgcccgacgggcttg
atcgatccgcccgtcgatatccgtccggcccgcacccaggtcgacgatctcgtcggcgag
gtgcgtgccaccgcgcaggccggctatcgctcgctgatcacggttctcacaaaacgcatg
gcggaggacctcaccgaatatctgcacgagcagggcattcgtgtccgctacatgcactcg
gacatcgacaccatcgagcgcatcgagatcatccgcgatcttcgcctcggcgccttcgac
gcgctggtcggcatcaacctgttgcgcgaaggcctcgacattcccgaatgcgcgctggtc
gccattctcgacgccgacaaggaaggttttctgcgcagcgagacctcgctgatccagacc
atcggccgcgccgcgcgcaacgtcgacggcaaggtgatcctctatgccgaccagatgacg
ggctcgatggagcgcgccatcgccgagaccaaccgccgccgcgagaagcaggtcgaatac
aataccgccaacggcatcacgccggagagcgtcaagaagcagatcggcgacatcctcaac
tccgtctacgagcgcgatcacgtgctggtggaggtcggcggccacgacatgaccgacgac
gtcatctcgatcggccacaatttcgaagccgtgctgggcgatttggaaacgcggatgcgc
gaggccgcggccgatctgaacttcgaggaagccgcgcgcctgcgcgacgaagtcaaacgc
ctgcgcgccaccgagctggccgtggtcgacgaccccaccgcaaaacagcgagcggtcacg
ggcaaggccggcgcctatgccggcaccaggaagtacggcgactcggcgaacctgccggtc
agcgccatgaagaacaagagcgccgcaaccgcgctcaaggccggcggcggcaagggctcc
cgcgtgcacaagccgcatctcgacgaaatgcacggcccggaatcgctgccttaccgcgaa
ggccgcgccttgccgtcaaagccgttcggcggcgagagccggatcatccagccgacagat
tccaggcagtcggggccggagttcgggccggcgccgaagtcgacgggcgggatgccgggg
cgccggggtgggtggaagaagcggtag
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