Bradyrhizobium sp. 62B: ML401_05375
Help
Entry
ML401_05375 CDS
T10244
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bray Bradyrhizobium sp. 62B
Pathway
bray02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bray00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ML401_05375 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bray03021
]
ML401_05375 (rpoD)
Transcription machinery [BR:
bray03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ML401_05375 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
LPD39
Lmo0850
Dict-STAT-coil
Motif
Other DBs
NCBI-ProteinID:
WIW47550
LinkDB
All DBs
Position
1331753..1333906
Genome browser
AA seq
717 aa
AA seq
DB search
MATKAKTLQAKDKEKDDKAADAPEKDSQDAPSPLLDLSDAAVKKMIKQAKKRGFVTFDQL
NEVLPSDQTSPEQIEDIMSMLSDMGINVTEADDSEGEEEKDEGGEDETDNELVEVTQKAV
TEVKKSEPGERTDDPVRMYLREMGTVELLSREGEIAIAKRIEAGREAMIAGLCESPLTFQ
AIIIWRDELNEGKIFLRDIIDLEATYAGPDAKGGMNNAMIAGPTGENGEAPAEGGQAAAA
VGAPAHVAPPAAPPSPTPFRAAPAAGNVGEGKDPGESAAEADMDEDDEFENQMSLAAIEA
ELKPKVVEIFDKIAESYKKLRKLQEQDIQNQLESTSHGPSLSPHQERKYRKLKDEIIVEV
KSLRLNQARIDSLVEQLYDINKRLVSHEGRLMRLADSHGVAREDFLRNYTGSELDPRWLN
RVSKLSAKGWKNFVHHEKDRIKDLRHEVHQLAALTGLEIVEFRKIVHSVQKGEREARQAK
KEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIR
QAITRSIADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRK
VLKIAKEPLSLETPVGDEEDSHLGDFIEDKNAILPIDAAIQSNLRETTTRVLASLTPREE
RVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDN
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaaggcaaagacgctgcaggcgaaggacaaggaaaaagacgacaaggcagcg
gacgcgccggagaaggattcccaggacgcgccctcgcccttgctcgacctgtccgacgcc
gccgtgaagaagatgatcaagcaggccaagaagcgcggcttcgtgaccttcgatcagctc
aacgaagtcttgccgtccgaccagacctcgcccgaacagatcgaggacatcatgtcgatg
ctctcggacatgggcatcaacgtcaccgaagccgacgatagcgaaggcgaggaagagaag
gacgagggcggcgaggacgagaccgacaacgagctcgtcgaagtcacccagaaggccgtc
accgaggtcaagaagagcgagccgggcgagcgcaccgacgatcccgtgcgcatgtatctg
cgcgagatgggcacggtcgagctgctctcccgcgaaggcgaaatcgccatcgccaagcgc
atcgaggccggccgcgaggcgatgatcgcgggtctctgcgaaagcccgctgaccttccag
gccatcatcatctggcgcgacgagctcaacgaaggcaagatcttcctccgcgacatcatc
gatctcgaagccacctatgccggccccgacgccaagggcggcatgaacaacgcgatgatc
gccggccccaccggcgagaacggcgaagctcccgccgagggcggccaggccgccgcggcc
gtcggcgcgcctgcgcatgtcgccccgcccgctgcgccgccgtcgccgaccccgttccgc
gccgcgcccgccgccggcaatgtcggcgaaggcaaggatcccggcgaatccgccgccgaa
gccgacatggacgaggacgacgagttcgagaaccagatgtcgctggcggcgatcgaggcc
gagctcaagccgaaggtcgtcgagatcttcgacaagatcgctgagagctacaagaagctg
cgcaagctgcaagagcaggacatccagaaccagctcgagagcacctcgcatgggccctcg
ctctcgccgcaccaggagcgcaaatatcgcaagctcaaggacgagatcatcgtcgaggtg
aagtcgctgcgcctcaaccaggcgcgtatcgattcactggtcgagcagctctacgacatc
aacaagcgcctcgtctcgcatgagggccgcctgatgcgccttgccgacagccacggcgtc
gcgcgcgaagacttcctgcgcaactataccggctcggagctcgatccgcgctggctcaac
cgcgtctcgaaactatcggccaagggctggaagaacttcgtccaccacgagaaggaccgc
atcaaggaccttcgccacgaggtgcaccagctcgccgccctcaccgggctcgagatcgtc
gaattccgcaagatcgtgcactccgtgcagaagggcgagcgcgaagcccgccaggccaag
aaggagatggtggaagccaacctccgtctcgtgatctcgatcgccaagaagtacaccaac
cgcggcctgcagttcctcgacctgatccaggaaggcaacatcggcctgatgaaggcggtc
gacaagttcgagtatcgccgcggctacaagttctcgacctacgccacgtggtggatccgc
caggcgatcacgcgctcgatcgccgatcaggcgcgcaccattcgcatccccgtgcacatg
atcgagacgatcaacaagatcgtgcgcacctcgcgccagatgctcaacgagatcggccgc
gagccgaccccggaagagctcgccgagaagctcggcatgcctttggagaaggtgcgaaaa
gttctcaagatcgccaaggagccgctgtcgctggagacgccggtcggtgacgaagaggat
tcgcatctcggcgatttcatcgaggacaagaacgcgatcctgccgatcgacgccgcgatc
cagtcgaacctgcgcgagaccacgacgcgcgtgctcgcatcgctcaccccgcgcgaagaa
cgcgtcctgcgcatgcgcttcggcatcggcatgaacaccgaccacacgctggaagaagtc
ggccagcagttctcggtgacgagagagcgtatccgccagatcgaagcgaaggcgctgcgg
aagctgaagcatccgtcgcggtcgaggaagctacggagcttcttggataattga
DBGET
integrated database retrieval system
