KEGG   Bradyrhizobium sp. 62B: ML401_13950
Entry
ML401_13950       CDS       T10244                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
bray  Bradyrhizobium sp. 62B
Pathway
bray00740  Riboflavin metabolism
bray01100  Metabolic pathways
bray01110  Biosynthesis of secondary metabolites
bray01240  Biosynthesis of cofactors
bray02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bray00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    ML401_13950 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ML401_13950 (ribD)
Enzymes [BR:bray01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     ML401_13950 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     ML401_13950 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: WIW49140
LinkDB
Position
3203390..3204538
AA seq 382 aa
MIFRILEDQYAQKAREAKDADLRFMRLALALGRRGQGRTWPNPAVGAVIVKNGVIVGRGW
TQPGGRPHGEPEALRRAGEAARGATLYVTLEPCSHFGKSPPCADAVIAAGIKRVVAAIED
PNPEVAGQGHARLRAAGVTVDVGLCAAEAAFDHAGHFRRIRDKRAHVILKLAVSPDGKIG
AAGVKPVAITGEAARNRVHLLRAQSDAILVGIGTVLADDPLLTCRLPGMAARSPVRVVLD
QSLRLPGASRLIGSARETPLWVVGSELAEAAAATRLGATGAQVIRVPAANASGLDLPAVL
RALAGKGITRLMVEGGSRVASSFVAADLVDEIWLFRGTEAVGSDGVDALDALPLSKITQS
QAYKVHASETFDKDTLTVYERA
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgatcttccgtatcctggaagaccagtacgcgcagaaggcccgcgaggccaaggacgcc
gatcttcgcttcatgcggctggcgctggcgctgggcaggcgcgggcaggggcgcacctgg
cccaatccggccgtcggtgcggtcatcgtcaagaacggggtcatcgtcggccgcggctgg
acgcaaccgggcgggcggccgcatggcgagcccgaggcgttgcggcgggcaggtgaagcg
gcacgcggcgccacgctctatgtcacgctggagccgtgctcgcatttcggcaagtcgccg
ccttgcgccgatgcagtgatcgcggccggcatcaagcgcgtggtggcggcgatcgaggat
cccaatccggaagttgcggggcagggccatgcgcgcctgcgcgccgccggcgttactgtg
gatgtgggcctgtgcgcggcggaagccgccttcgaccatgccgggcatttccgccgcatc
cgcgacaagcgcgcgcatgtaatcctgaagctcgcggtgtcgcccgacggcaagatcggc
gcggccggcgtcaagccggtcgcgatcaccggggaagcggcgcgcaatcgcgtgcatctg
ctgcgtgcgcagagcgatgccatcctggtcggcatcggaacggtgctggcggacgatccg
cttctcacctgccgcctgccgggcatggcggcgcgctcgccggtgcgcgtggtgctcgat
cagagcctgcggcttcccggcgcaagcagactgataggctccgcgcgcgagacgccgctc
tgggtggtggggtctgagctcgcggaagccgccgcggcgacgcggctgggtgcgaccggc
gcgcaagtgatccgtgtcccggcggcaaatgcctccgggctcgatctgccggcggtgctg
cgggcgctggccgggaagggcatcacccgcctgatggtcgagggcggcagccgggtggcg
tcctcattcgtcgcggccgatctagtcgacgagatctggctgttccgcggcacggaagcg
gtcggcagtgacggcgtcgatgcgctcgatgcattgcccctgtcgaaaatcacgcagtcg
caggcctacaaggttcatgctagcgagacattcgacaaggatactctcaccgtctacgag
cgcgcgtaa

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