KEGG   Bradyrhizobium sp. 62B: ML401_14530
Entry
ML401_14530       CDS       T10244                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bray  Bradyrhizobium sp. 62B
Pathway
bray03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bray00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ML401_14530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bray03019]
    ML401_14530
Messenger RNA biogenesis [BR:bray03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ML401_14530
SSDB
Motif
Pfam: RNase_J_b_CASP RMMBL RNase_J_C Lactamase_B_2 Lactamase_B
Other DBs
NCBI-ProteinID: WIW49248
LinkDB
Position
3317195..3318865
AA seq 556 aa
MAKPEELVFAPLGGVGEIGMNLSIYGLGNRQQRAWMAVDLGVSFGDEEHLPGIDLIMPDI
SFLEKERKNLMGLVLTHAHEDHFGAIIDLWPKLKCPIYATQFSAALFEAKCAAERNAPKI
PVTVVPSGGRIDVGPFNVEFIPVAHSIPEAHALAIHTSAGTVLHTGDWKIDPTPTLGRPT
DEKRLRELGDEGLLALIGDSTNAVRDGRSPSEAEVARTIIDLVKSAKGRVAVTTFASNVA
RIKAVAAAAKAADREVVVVGRAMERVVQVARETGYLDGVQNFRSPEVYGHLPQDKVLALC
TGSQGEPRAALARIANDDHPEITLNRGDSVIFSSRTIPGNEKAVGSIINNLVLQGVEIIT
DRDALVHVSGHPRRDELRDLIAWTRPQLLIPVHGEALHLHEHAKLARAAGVPRVLVCRNG
DLVKLGPGDPGIVGEVPSGRLYKDGTILEDSKSRAVVERRRMAFSGCAFVAIAMTEQGEL
ADDPEVDLVGIPEKNRAGDPFDDIVFDAVVSTVEGLPKARRRDADALAESVRRAVRAVIN
EHWGKKPPCLVHVLTV
NT seq 1671 nt   +upstreamnt  +downstreamnt
atggcgaagcccgaggaactggtatttgcgccgctcggcggcgtcggcgagatcggcatg
aacctgtcgatctacggcctcggcaaccgccagcagcgcgcgtggatggcggtcgatctc
ggcgtctccttcggcgacgaggagcatctgcccggcatcgacctgatcatgcccgacatc
tccttcctcgagaaggagcgcaagaacctgatgggcctcgtgctgacccacgcccatgag
gaccatttcggcgccatcatcgatctctggccgaagctgaaatgcccgatctatgcgacg
cagttcagcgccgccttgttcgaggccaaatgcgccgccgagcgcaacgcgccgaagatc
ccggtgacggtggtgccgtcgggcgggcgcatcgacgtcggcccgttcaacgtcgagttc
attcccgtcgcgcattccattccggaagcgcacgcgctggcgatccacacctcggccggc
acggtgctgcacaccggcgactggaagatcgacccgaccccgactttggggcgtccgacc
gacgagaaacggctgcgcgagctcggcgacgagggcctgctcgccctgatcggcgattcc
accaatgcggtgcgcgacggccgctcgccctcggaagccgaggttgcccggaccatcatc
gacctcgtcaaatcggccaagggccgcgttgccgtgaccacgttcgcctccaacgtcgcg
cgcatcaaggccgtcgccgccgctgcgaaagccgccgaccgcgaggtcgtcgtggtcggc
cgcgccatggagcgcgtggtgcaggtcgcgcgcgagaccggctatctcgacggcgtgcag
aatttccgctcgcccgaggtctacggccacctgccgcaggacaaggtgctggcgctgtgc
accggcagccagggcgagccgcgcgccgcgctggcgcgcatcgccaatgacgaccatccc
gagatcacgctcaaccgcggcgacagcgtgatcttctcctcgcgcaccattcccggcaac
gagaaggccgtcggctcgatcatcaacaacctcgtgctgcagggcgtcgagatcatcacc
gaccgcgacgcgctggtccacgtttccggccatccccgccgcgacgaattgcgcgacctg
atcgcctggacccggccgcagctgctgatccccgtccatggcgaggccctgcatctgcac
gagcacgccaagctcgcgcgcgccgccggcgtgccgcgtgtgctggtctgccgcaacggc
gacctcgtcaagctcggccccggcgatcccggcatcgtcggcgaggtcccgtcgggccgt
ctctacaaggacggcacgattttggaggattccaagtcccgcgccgtggtcgagcggcgc
cgcatggcgttttccggctgcgccttcgtcgccattgccatgaccgagcagggcgagctc
gccgacgatcccgaggtcgatctggtcggcatccccgagaagaaccgggccggcgacccc
ttcgacgacatcgtcttcgatgccgtggtctccacagtcgagggcctgccgaaggcgcgc
cgccgcgatgcggatgcgctggctgaatcggtgcgacgcgctgtccgggccgtcatcaac
gaacattggggcaaaaagcccccctgtctggtacacgtactgacagtctaa

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