Bradyrhizobium sp. 62B: ML401_14710
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Entry
ML401_14710 CDS
T10244
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bray Bradyrhizobium sp. 62B
Pathway
bray03030
DNA replication
bray03430
Mismatch repair
bray03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bray00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ML401_14710 (dnaE)
03430 Mismatch repair
ML401_14710 (dnaE)
03440 Homologous recombination
ML401_14710 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bray03032
]
ML401_14710 (dnaE)
03400 DNA repair and recombination proteins [BR:
bray03400
]
ML401_14710 (dnaE)
Enzymes [BR:
bray01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ML401_14710 (dnaE)
DNA replication proteins [BR:
bray03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ML401_14710 (dnaE)
DNA repair and recombination proteins [BR:
bray03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ML401_14710 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
DUF6374
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WIW49283
LinkDB
All DBs
Position
3356341..3359844
Genome browser
AA seq
1167 aa
AA seq
DB search
MPSAGFVHLHVHSAYSLLKGSIKIAKLAELAKKDHQPALALTDTDNMFGALEFSDKMAGS
GIQPIVGCELAIDFGDQDPNARNAMGPSRVVLLAAQERGYRSLMRLNSRAFLETPDTHAC
HIKFDWLEGETEGLIALTGGPDGPISLALAGGHAELAALRCERLAGLFGDRLYIELQRHN
TEKERRVESGLIDIAYAKGLPLVATNEPYFATTDDYEAHDALLCIAGGRLIAETEREQLT
PDHRFKTRAEMAVLFADIPEALASTVEIAERCSFRPMTRKPILPFFTVGAAQSSDAASVE
AAELKRQAEEGLAKRLSVHGLSQGTTEEDYNKRLAFELDVIMRMKYAGYFLIVSDFIKWA
KSQGIPVGPGRGSGAGSLVAWALTITDLDPIKFGLLFERFLNPERVSMPDFDIDFCQDRR
GEVIKYVQERYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQVDKLTKLVPQNPAAPV
TLAAAIESEPKLQAFRDEDPVVARAFDIAQRLEGLTRHASTHAAGIVIGDRPLSELVPMY
RDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLDVACKLLKPRDIHVDLATLPIDDA
ESYQMLARGEVVGVFQVESQGMRRALVDMRPDRFEDIIALVALYRPGPMANIPTYCARKH
GDEEPEYLHPVLEPILKETFGVIIYQEQVMQIAQVMSGYSLGDADLLRRAMGKKIRAEMD
KQRDIFVAGAVKNGVPKGQAETIFELLAKFADYGFNKSHAAAYALVSYHTAYMKAHYPVE
FIAASMTLDLNNTDKLSEFRSEAQRLGIKVEPPNINRSGATFEVGEKTIYYALAALKGVG
IQAIEQIIEERTKRGLFTSLADFAARVNPRAINKRIIESLAAAGAFDTLEPNRARVFAGA
DSILAACQRAHQAETIGQNDMFGMSADAPTIMLPQIEPWLPAEKLRREYDAVGFFLSGHP
LDDYATVLKRLRVQSWAEFSRAVKTGATAGKVAATVVSRMERRTKTGNKMGIMGLSDPTG
HFEAVLFSEGLAQYRDVLEPGAAVLLQLGAELQGEDVRARVLHAEPLDDAAAKTQKGLRI
FVRDTKPLESIAKRLAGPDMAASNGAAPKIGSPGIAPRSNGDGEVSLVMMLDLETEVEMK
LPGRFKVSPQIAGAIKAVAGVVDVQQI
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcgccggatttgtccaccttcacgttcactcggcctattcgctgctcaagggc
tcgatcaagatcgccaagctcgccgagcttgcgaagaaagaccaccagccggccctggcg
ctcaccgacaccgacaacatgttcggtgcgctggagttctccgacaagatggcgggctcc
ggcatccagccgatcgtcggctgcgaactggcgatcgatttcggcgatcaggatccgaat
gcgcgcaacgcgatggggccgtcgcgcgtggtgctgctggcagcgcaggagcgcggctat
cgcagcctgatgcggctgaactcgcgcgcattcctggagacgcccgatacccacgcctgc
cacatcaagttcgactggctcgagggcgagaccgagggcctgatcgccctgacgggcgga
ccggacgggccgatctcgctggcgctggccggcggtcatgccgagctcgcggccttgcgc
tgcgagcgtctggccggcctgttcggcgatcgcctctacatcgaattgcagcgccacaac
accgagaaggagcggcgcgtcgaaagcggcctgatcgacatcgcctatgccaagggcctg
ccgctggtcgcaaccaacgagccgtatttcgcgacgacggacgattacgaagcgcatgac
gcgctgctctgcatcgccggcggccggctgatcgcagagaccgaacgcgagcagctcacg
cccgatcatcgcttcaagacgcgcgccgagatggcggtgctgttcgccgacattccggag
gcgctggcctcgacggtggagatcgccgagcgctgctcgttccgcccgatgacgcgcaag
ccgatcctgccgttcttcaccgtcggcgccgcgcagagctcggacgcagcctcggtcgag
gccgccgagttgaagcgccaggcggaggaggggctcgccaagcgcctcagcgtccacggc
ctgtcgcaaggcacgaccgaggaggactacaacaagcgcctggcgttcgagctcgacgtc
atcatgcgcatgaaatatgcgggctacttcctgatcgtgtccgacttcatcaaatgggcg
aagagccagggcattccggtcgggccgggccgcggctcgggcgcgggctcgctggtggcg
tgggcgctgaccatcaccgacctcgacccgatcaagttcggcctgctgttcgagcgcttc
ctcaatcccgaacgcgtctcgatgccggacttcgacatcgacttctgccaggaccgccgc
ggcgaggtgatcaagtacgtccaggagcgctacggccgcgaccaggtcgcgcagatcatc
actttcggtacgctgcaggcgcgcggcgtgctgcgcgacgtcggtcgcgtgctgcagatg
ccctatggccaggtcgacaagctgaccaagctggtgccgcagaatccggccgcgcctgtc
acactggcggccgcgatcgagagcgagccgaagctgcaggcgttccgcgacgaagatccg
gtcgtggcgcgcgccttcgacatcgcccagcgcctcgaaggcctgacccgccacgcctcg
acgcacgcggccggcatcgtgatcggcgatcgccccttgagcgaactcgtgccgatgtac
cgcgatccgaagtcggacatgccggtgacccagttcaacatgaaatgggtcgagccggcc
ggcctcgtcaagttcgacttcctcggcctgaagacgctgaccgtgctcgacgtcgcctgc
aagctgctcaagccgcgcgacatccacgtcgatctcgccacgctgccgatcgacgacgcc
gagagctaccagatgctggcccgcggcgaggtggtcggcgtgttccaggttgaaagccag
ggcatgcggcgcgcgctggtcgacatgcgcccggaccgtttcgaggacatcatcgcgctg
gtggcgctgtatcggccgggcccgatggcgaacatcccgacctattgcgcgcgcaagcac
ggcgacgaggagccggaatatctgcatcccgtcctggagccgatcctgaaggaaaccttc
ggcgtcatcatctaccaggaacaggtgatgcagatcgcgcaggtgatgtcgggctattcg
ctcggcgacgccgacctcctgcgccgcgccatgggcaagaagatccgcgccgagatggac
aagcagcgcgacatcttcgtcgcgggcgcggtgaagaacggcgtgccgaagggccaggcc
gagaccatcttcgagctgctggcgaagttcgccgattacggcttcaacaagagccatgcg
gcagcctatgcgctggtgtcctaccacaccgcctacatgaaggcgcattatccggtcgag
ttcatcgcggcgtcgatgacgctcgatctcaacaataccgacaagctctccgaattccgc
tccgaggcgcagcgcctcggcatcaaggtcgaaccgccgaacatcaaccgctccggcgcg
accttcgaggtcggcgagaagacgatctactacgcgctcgcagcgctcaagggcgtcggc
atccaggcgatcgagcagatcatcgaggagcgcaccaagcggggattgttcacctcgctc
gccgacttcgcagcacgggtcaatccgcgcgcgatcaacaagcgcatcatcgaaagtctc
gccgccgccggcgccttcgacacgctggagccgaaccgcgcccgcgtcttcgccggcgcg
gattcgatcctcgccgcctgccagcgcgcgcatcaggccgagaccatcggccagaacgac
atgttcggcatgtcggcagatgcgccgaccatcatgctgccgcagatcgagccgtggctg
ccggccgaaaaactccgccgcgaatacgacgccgtcggcttcttcctgtcgggccatccg
ctcgacgattacgccaccgtgctgaagcggctgcgggtgcagagctgggcggaattctcg
cgcgcggtgaagaccggcgccaccgccggcaaggtcgcggccaccgtggtctcgcgcatg
gagcggcgcaccaagaccggcaacaagatgggcatcatggggctctccgatcccacgggc
catttcgaggcggtgctgttctccgagggccttgcgcaatatcgcgacgtgctggagccg
ggcgccgccgtgctgctgcaactgggcgccgagctgcagggcgaggacgtccgcgcccgc
gtgctgcatgccgagccgctcgacgatgccgccgccaagacgcagaagggtctgcgcatc
ttcgtgcgcgacaccaagccgctggagtcgatcgccaagcgtttggccggccccgacatg
gcggcatcgaacggcgcggcgccgaagatcggcagtccgggcatcgcgccgcgttcgaac
ggtgacggcgaggtctcgctggtgatgatgctcgacctcgagaccgaggtcgagatgaag
ctgccgggccgcttcaaggtctcgccgcagatcgccggcgcgatcaaggcggtcgcgggc
gtggtggacgtgcagcagatctga
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integrated database retrieval system
