Bradyrhizobium sp. 62B: ML401_15620
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Entry
ML401_15620 CDS
T10244
Name
(GenBank) helicase-related protein
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bray Bradyrhizobium sp. 62B
Pathway
bray03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bray00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ML401_15620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bray03400
]
ML401_15620
Enzymes [BR:
bray01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ML401_15620
DNA repair and recombination proteins [BR:
bray03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
ML401_15620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
TRCF
UvrB_inter
ResIII
CarD_TRCF_RID
RecG_dom3_C
Cas3-like_C_2
AAA_30
UB2H
AAA_25
AAA_22
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
WIW49851
LinkDB
All DBs
Position
3538381..3541485
Genome browser
AA seq
1034 aa
AA seq
DB search
MLALHLLAQWKQSGRSGIVFLAENENRAERLGSVIHALDPSCEVLVFPRLNTLPFDQLEP
SHELAGRRASVLGRLAKSKKPLFLVSTAEAVMERLPPPASLSRLSVSLKVGGTFSERELE
TRLESLGYDLDDEPDYPGGALFHGQTFEIFPAGALGPFRIEHSDRAIKRIVAFDPNEHRI
IFETKELLVDPMSERLGLAGKRGKRATLFDYCGRAKWIADAGVPAHADVWLDTIEEAAPR
AEREREYLGRRDWKQLSRGMKVLPRAASFQTIPEFSKLTSARKALRAFVEETRRAGSRLL
LVAAQEDDLRVMERMSGLKAPRCDDWEEAASGRSGEAALLADLDAGFIVPGKKPLVVVTA
SDVLGSRAHHPQPMARAWSTAFDHADVPEQGTVVIHLQRGLGVLDGLQTVNTGGGALREM
IRLKFAGDNAVLVPPPDLALMWPYAAELGKLALDKADGSTWWARRTEAEREIQVAGKALA
KHISQRRRRRGEKLVPPGSAYEKFVARFPYFTTTDQAKAIADVLDDLASGHPMDRVICGD
VGFGKTEVALRAAAAVVLSGKQVAIAVPTTVLARQHVATFQKRFAPFGIELGNLSRATSG
AELRETREGLRSGRIKVVIGTQALTGKDVKFSDLGLVIIDEEQHFGAAEKAKLAGLAKNV
HVLMMSATPIPRTLAAGLAGFRDLSVIASPPVHRLPVATRIAPLSDAAIASALLREQRRH
GQSFLICPRIQDLDPMLARVQAVAPDLRIVCLHGRLAADEIDDRMMSFVEGRADVLLATN
IVESGLDIPRANTIVVCWPEKFGLAQLHQLRGRVGRSGIRAFAHLLTETASGQSEKRLAV
LEEFSRPGAGFAISERDLDLRGAGDLFSEQQSGHVQVFGPVLYSHLLKMASEKLDEGQAV
WVPDLNLPVADMLPETYVQSEPVRLELYARAARCTDEDDLEDLEEETARRFGPLPKVARD
FFAAGRLRIECKRRGIIRLDVGPEAAAATFLPGRLRKSRGKSLQRDGDRVVYHAKMQDAP
FERVEELLELLDEG
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
gtgctggctctgcatctgcttgcccaatggaagcagtccggacgcagcggcatcgttttt
ctcgccgagaacgagaacagggcggagcggctgggcagcgtcattcacgccctcgacccc
tcctgcgaagtcctggtgtttccgcgcttgaacaccttgccgttcgaccagctcgagccg
tcgcacgagctcgcggggcgcagagcctccgtcctggggcgcctcgcgaaatccaagaag
ccgctctttctggtctcgactgcggaagccgtgatggagcgcctgccgccgccggcgagc
ctgtcgcgcctcagcgtgagcttgaaggtgggcggcaccttctccgagcgcgagctcgag
acgcgtctcgaatccctcggatacgatctcgacgacgagccggattatccgggcggcgcg
ctgttccacggccagaccttcgagatattccccgcgggcgcgctggggccgttccggatc
gagcattccgatcgcgcgatcaagcggatcgtggcgttcgatccgaacgagcacaggatc
atcttcgagaccaaggagcttctcgtcgatcccatgtcggagcggcttggccttgccggc
aaacgcggcaagcgcgcgacgctcttcgactattgcgggcgtgccaaatggatcgccgac
gccggggttcccgcgcatgccgacgtttggctcgataccatcgaggaggccgcgccgcgc
gccgagcgtgagcgcgaatatcttggacggcgcgattggaagcagctctccaggggcatg
aaggtgttgccgcgcgcagcgtccttccagaccatcccggagttttcgaagctgacatcc
gccaggaaggcgctgcgtgcgttcgtcgaggagacgcggcgggcaggttcgcgccttctc
ctcgtcgctgcgcaggaggacgatctgcgcgtgatggagcgcatgagcggcctcaaggcg
ccgcgctgcgacgattgggaggaggcggcgagcggacggagcggcgaggcggcgctgctg
gccgatctcgatgcgggcttcatcgtgccgggcaagaagcctctcgttgtcgtgacggcc
tccgacgtgctcggcagccgggcgcatcatccgcagccgatggcgcgcgcgtggagcacg
gctttcgaccatgccgatgtgcccgagcagggcacggtggtcatccatctgcagcgcggc
ctcggcgtgctcgacggcctgcagaccgtgaacaccggcggtggcgcgctgcgcgagatg
atccgcctgaagttcgccggcgacaatgcggtgctcgtgccgccgcccgatctcgccctg
atgtggccctacgcggccgaactcggcaagctggccctcgacaaggcggacggcagcaca
tggtgggcccgccgcaccgaagccgaacgcgaaatccaggtcgccggcaaggcgctcgcc
aagcacatcagccagcgccgccggcggcgcggcgaaaagctggtcccgccgggatcggcc
tatgagaagttcgtcgcgcgtttcccttacttcacgacgaccgaccaagccaaggcgatc
gccgacgtgctggacgatctcgcctccggtcatcccatggaccgggtgatctgcggcgac
gtcggcttcggcaagaccgaggtggcgctgcgggcggcggcggccgtggtgctgtcgggc
aagcaggtcgcgatcgccgtgccgacgacggtgctggcgcgccagcatgtcgcaaccttc
cagaagcgctttgcgccgttcgggatcgagctcggcaatctgtcgcgggcaacctcgggc
gcggagctgcgggagacccgggagggcctgcgcagcggccggatcaaggttgtgatcggc
acccaggcgctcacaggcaaggacgtcaagttcagcgatctcggcctcgtcatcatcgac
gaggagcagcactttggcgcggcggagaaggccaagctcgccggccttgccaagaacgtc
catgtgctgatgatgagcgcgacgccgatcccgcgcacgctcgccgcgggtcttgctggc
ttccgcgacctcagcgtgatcgcctcgccgccggtgcaccggttgccggtcgcgacccgg
atcgcgccgctgtcggatgccgccatcgcctcggcgctgctgcgcgagcagcggcgccac
ggccagagcttcctgatctgcccacgcatccaggatctcgatccgatgctggcgcgggtg
caggcggtggcgcccgacctgcgcatcgtctgcttgcacggcagattggcggcggacgag
atcgacgatcgcatgatgagcttcgtcgagggcagggccgacgtgctgctcgcgaccaac
atcgtcgagagcggtctcgacattccccgcgcgaataccatcgtggtctgctggccggag
aaattcggcctcgcccagctgcatcagctgcgcgggcgcgtcggccgaagcggtatccgc
gccttcgcccatctcctgaccgagacggcgtccggacaatccgagaagcggctggccgtg
ctcgaggagttcagccgccccggcgcgggctttgccatcagcgagcgcgacctcgatctc
agaggcgcgggcgatttgttttcggagcagcaatcgggtcacgtccaggtgttcgggccg
gtgctctacagccacttgctgaagatggcctcggagaagctcgacgaagggcaggcggtg
tgggtgccggacctgaacctgccggtcgcggacatgctgccggagacctatgtgcagtcc
gagccggtgcggctcgagctctatgcgcgcgccgcaagatgcactgacgaggacgacctc
gaagacctcgaggaggaaaccgcccgccgcttcggacccttgccgaaggtcgcgcgcgac
ttcttcgctgcaggaaggctcaggatcgaatgcaagcgcagaggcatcatccgcctcgac
gtcggccctgaagctgcggccgcgacgttcctgcctggacgcctgcggaaatcccgaggc
aagtcgctgcagcgcgacggcgatcgcgtcgtctatcacgccaagatgcaggacgcgccg
ttcgagcgggtcgaggagctgctcgagttgctggacgaaggctag
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