Bradyrhizobium sp. 62B: ML401_17065
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Entry
ML401_17065 CDS
T10244
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bray Bradyrhizobium sp. 62B
Pathway
bray03410
Base excision repair
bray03430
Mismatch repair
bray03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bray00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ML401_17065 (recJ)
03430 Mismatch repair
ML401_17065 (recJ)
03440 Homologous recombination
ML401_17065 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bray03400
]
ML401_17065 (recJ)
DNA repair and recombination proteins [BR:
bray03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ML401_17065 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ML401_17065 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ML401_17065 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
ATPgrasp_N
Motif
Other DBs
NCBI-ProteinID:
WIW49719
LinkDB
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Position
complement(3837044..3838885)
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AA seq
613 aa
AA seq
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MTPPATALPVEAPQAFLGVARSLTDKLWRDRLDARGAAKALAIVQQHQLPELLARVLAGR
GVDIDAVADFLDPTIRKLMPDPFTVTEMEAAAKRIADAAAKGETVAIFGDYDVDGATSAA
LLAWHLRHCGLDPLIHIPDRIFEGYGPNVEAVRGLAARGATLLVTVDCGTTSIEPLAEAK
RLGMSVVVIDHHQAGTELPEVDALVNPNRLDDLSGLGHLAAVGLVLVTLVAVNRELRQRG
FWSAEMPEPDLLGMLHHVALGTVADVAPLIGLNRAFVAKGLIAMRRRDHVGHTALMDVAR
LNGPPEAWHLGFMLGPRVNAGGRIGRADLGVRLLLEGDSVEAARIAAELDRLNSERRVIE
QAAEAQAEAEALASIGLEDKLGVIVTASEGWHPGVVGLVASRLKEKFARPAFAIALEPGG
IGTGSGRSIAGVDLGKAVRQAVADGILLKGGGHAMAAGVTLRKEKLAEFRAYLENALAQD
VAEARHVNELYIDGAVSARAVTTELAATLNRAGPFGSGNPEPVLALPAHQLVFADEVGQA
HLRLRFKSGDGAIVNGIAFRSIGQKLGNALLANRGQQLHVAGSLSVDRYQGAERVQFRVV
DVALPDQGPSVIR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgcccgccactgccttacccgtcgaagcgccgcaggcgttcctgggcgtggcg
cgctcgctcaccgacaagctctggcgcgaccggctggacgcgcgcggggcggccaaggcg
ctcgccatcgtgcagcagcatcaattgccggagctgctggcccgggtgctggcgggccgc
ggagtcgatatcgatgcggtcgcagatttcctcgatccgaccatccgcaagctcatgccg
gacccgttcacggtgacggagatggaggcagccgccaagcggatcgcggatgccgcagcg
aagggcgaaacggtcgcgatcttcggcgattacgatgtcgacggcgcaacctcggcggcg
ctgctcgcctggcatctgcgccattgcggcctcgatccgctgatccacattcccgatcgc
atcttcgagggctacggccccaacgtcgaggccgtgcgcgggctggcggcgaggggcgcc
acgctgctcgtgaccgtcgattgcggcaccaccagcatcgagccgctcgccgaagccaag
cgcctcggcatgtccgtggtcgtgatcgaccatcaccaggccggcacggagctgccggag
gtcgacgcgctggtcaacccgaaccggctcgacgatctctcagggctcggccatctcgcc
gccgtcggcctcgtgctggtgacgctggtcgcagtcaatcgcgaactgcgccagcgcggt
ttctggagcgcggagatgcccgagccggatctgctcggcatgctgcatcacgtcgcgctc
ggcacggttgcggatgtggcgccgctgatcggcctcaaccgggccttcgtcgccaagggc
ctgatcgcgatgcgccggcgcgaccatgtcggccataccgcgctgatggacgtggcgcgg
ctgaacgggccgccggaggcctggcatctcggcttcatgctggggccgcgcgtcaacgcc
ggcggccggatcggccgcgccgatctcggcgtgcggctgctgctcgaaggcgacagcgtc
gaggccgcgcggatcgccgccgagctcgaccgcctcaacagcgagcgccgcgtcatcgag
caggcggccgaagcgcaagccgaagccgaggcgctggcctcgatcgggttggaggacaag
ctcggcgtgatcgtcacggcctccgaaggctggcaccccggcgtcgtcggcctcgtcgcc
tcccgcctgaaggagaagtttgcgcggccggccttcgccattgccttggagcccggtggc
atcggcaccggctcgggccgctcgatcgccggggtcgatctcggcaaggcggtaaggcag
gcggtggccgacggcatcctgctcaagggcggcggccacgcgatggccgcgggcgtgacg
ctgcggaaggagaagctcgccgaatttcgcgcctatctcgagaacgcgctggcgcaggac
gtcgccgaggcgcggcacgtcaacgagctctatatcgacggtgccgtctccgcgcgcgcc
gtgacgaccgagcttgcggcgacgctcaaccgcgccggtcccttcggcagcggcaatcca
gaacccgtgctggcgctgccggcacatcagctcgtctttgccgacgaggtcggccaggcg
catctgcggctgcgcttcaagtcgggcgacggcgccatcgtcaacggcatcgcgttccgt
tcgatcggccagaagctcggcaacgcgctgctcgccaatcgcggccagcaactgcatgtc
gcgggctcgctctcggtcgatcgctaccagggtgccgagcgggtgcaattccgcgtcgtc
gacgtcgcgctaccggaccaggggccatccgtgatcagatga
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