Bradyrhizobium sp. 62B: ML401_19265
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Entry
ML401_19265 CDS
T10244
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bray Bradyrhizobium sp. 62B
Pathway
bray00521
Streptomycin biosynthesis
bray00523
Polyketide sugar unit biosynthesis
bray00525
Acarbose and validamycin biosynthesis
bray00541
Biosynthesis of various nucleotide sugars
bray01100
Metabolic pathways
bray01110
Biosynthesis of secondary metabolites
bray01250
Biosynthesis of nucleotide sugars
Module
bray_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bray00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ML401_19265 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ML401_19265 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
ML401_19265 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ML401_19265 (rfbB)
00525 Acarbose and validamycin biosynthesis
ML401_19265 (rfbB)
Enzymes [BR:
bray01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
ML401_19265 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
WIW43664
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Position
complement(4294853..4295911)
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AA seq
352 aa
AA seq
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MRILVTGGAGFIGSAVCRRLALQTGAAVINIDKLTYAANLASLASIEKLETYAFLQSDIC
HRAAMDLAFADYEPDAIIHLAAESHVDRSINGPDAFVNTNVVGTYTLLETARAYYERLPA
SRRKQFRFIHVSTDEVYGSLGPDDLFREDTPYRPSSPYSASKAAADHLALAWFRTYGLPV
IVSNCSNNYGPYQFPEKLIPLTILNAIDRKPLPVYGDGRNIRDWLHVDDHAAGLIRLLHE
GRPGEKYNFGGDAQRSNLEVVTRICDVVDRLSPGAGCRRSLITFVPDRPGHDTRYAIDAS
KAHRELGWKPIRTFEHGLFETVGWYLKNRAWWERARSGVYDGSRLGLLAAQN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcttggtgaccggcggagcgggctttatcggttctgcggtctgtcgccgtttg
gccctacagactggtgccgcagtgatcaacatcgacaagttgacgtacgcagccaatctg
gcttcgctcgcgagcatcgagaagctggagacttatgcgttcctacagtccgacatctgc
catcgcgcggccatggatcttgcgttcgccgactatgagcctgacgcgatcatacatctg
gccgccgaaagccacgttgaccggtccatcaacggacccgacgccttcgtcaataccaat
gtggttggcacctacacgctcctggagacggccagagcctactacgaacgtctaccggct
tcgaggcggaagcagttccgattcatccatgtgtcgacagacgaagtctacggctcgttg
gggccagatgatctatttcgcgaggatacgccctacaggccgagctcgccctattcggcg
agcaaggccgccgcggaccacctcgcactcgcgtggtttcggacctacggtctgccggtg
atcgtgtcgaactgctcgaacaattacgggccgtatcagtttccggaaaagctcatcccg
ctgacgatcctcaatgcgatcgaccggaagcctctgccggtctatggcgacggaaggaat
atccgcgactggcttcacgtcgatgatcatgccgcgggcttgatacgacttttgcacgaa
ggaaggcccggcgagaagtacaacttcggcggagatgcccagcgatccaacctggaggtc
gtcacccgcatctgtgacgttgtggatcgcttatctccgggcgcggggtgcagacgttct
ctcattacgttcgtgccggatcgtcccgggcatgatacccgctatgcaatagacgcatcg
aaagcacatcgcgagctcggctggaaaccgatcagaaccttcgaacacggcctgttcgaa
accgtcggctggtatctcaagaaccgcgcctggtgggagcgtgctcgcagcggcgtctat
gacggttcacgtctgggtctcctggccgcccaaaactga
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