Bradyrhizobium sp. 62B: ML401_20495
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Entry
ML401_20495 CDS
T10244
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bray Bradyrhizobium sp. 62B
Pathway
bray03420
Nucleotide excision repair
bray03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bray00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ML401_20495
03430 Mismatch repair
ML401_20495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bray03400
]
ML401_20495
Enzymes [BR:
bray01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ML401_20495
DNA repair and recombination proteins [BR:
bray03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ML401_20495
MMR (mismatch excision repair)
Other MMR factors
ML401_20495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
HHH
AAA_12
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WIW43897
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All DBs
Position
4537523..4539580
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AA seq
685 aa
AA seq
DB search
MATYLDTLNAEQRRAVEHGVADGATVGAPLLVIAGAGSGKTNTLAHRVAHLIVAGSDPRR
ILLMTFSRRAAAEMAGRVERIARKVLGENNAAIMRDALTWAGTFHGIGARLLREYAERIG
VDPAFTIHDREDSADLMNLVRHERGLSKTESRFPAKGTCLSIYSRCVNAEMEIEKVLGQH
YPWCAGWAAELKGLFAAYVEAKQAQHVLDYDDLLLYWSQMMSDALIAEEIGGRFDHVLVD
EYQDTNRLQSSILLALKPDGRGLTVVGDDAQSIYSFRAATVRNILDFPQSFSPRAEMITL
DRNYRSTQAVLAAANGVIGLARERFTKNLWTDRTASHKPQLVTVHDEADQARYIVEEVLA
NREQGALLKHQAVLFRTSSHSGPLEIELTRRNIPFVKFGGLKFLDAAHVKDVLALLRFAE
NPRDRVAGFRILHLLPGIGPATAQRVLDQMAESMDPLHALAHLPVPARTGDDWIAFVRTV
ENLRCSEWPVDLERVRLWYEPHLDRLHEDSETRRADLMQLEQIASGYPSREKFLTELTLD
PPDATSDKSGPPLRDEDYLILSTIHSAKGQEWKSVFVLNVVDGCMPSDLGAGTSAELEEE
RRLLYVAMTRAKDDLHLVVPQRFFVHGQAAKGDRHVYASRTRFIPEQLVYLFERTAWPKS
AAGAARTAAQGPKIDIGARMRGMWR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacatatctggacacgctcaatgcggagcagcgccgcgccgtcgagcatggcgtg
gccgacggcgcgaccgtgggcgcccccctgctcgtcatcgcaggcgccggctccggcaag
accaacacgctggcccaccgcgtcgcgcatctgatcgtcgcaggtagcgatccgcgccgc
atcctgctgatgacattctcccgacgcgcggcggccgagatggccggccgggtcgagcgc
atcgcccgcaaggtgctgggcgagaacaacgccgcgatcatgcgcgatgccctcacctgg
gccggcaccttccacggcatcggcgcgcggctgctgcgcgaatatgccgagcggatcggc
gtcgaccctgccttcacgatccacgaccgcgaggactccgccgacctgatgaacctggtc
cggcacgagcgcgggctgtcgaagaccgagagccgctttccggccaagggcacgtgtctg
tcgatctactcgcgctgcgtcaatgccgagatggagatcgagaaggtgctcggccagcat
tatccctggtgtgcgggatgggccgccgagctgaagggcctgttcgcagcctatgtcgag
gccaagcaggcccagcatgtgctcgattacgacgatctgctgctctattggtcgcagatg
atgagcgatgcgctgatcgcggaagaaatcggcggccgcttcgaccacgtgctggtcgac
gaatatcaggacaccaaccgcctgcaatcctcgatcctcctggcgctcaagcccgacgga
cgcgggctcaccgtggtcggcgacgacgcacagtcgatctactcgttccgcgccgccacc
gtgcgcaacatcctggattttccgcagagcttctcgccccgcgcggagatgatcacgctc
gaccgcaactaccgctcgacccaggccgtgctcgccgcggccaatggcgtcattggactc
gcacgcgagcgtttcaccaagaacctctggaccgaccgcaccgcctcgcacaagccgcag
ctcgtcaccgtgcatgacgaggccgaccaggcccgctacatcgtcgaggaggtcctggcg
aaccgcgagcaaggcgcgctgctcaagcaccaggcggtgctgttccggacgtcctcgcat
tccggcccgctcgagatcgagctgacccgccgcaacattccctttgtgaaattcggcggg
ctgaaattcctcgacgccgcgcacgtcaaggacgtgctggccttgctgcgcttcgccgag
aatccgcgcgaccgcgtcgcaggtttccgcatcctgcatctgttgccgggtatcggcccc
gcgaccgcgcagcgcgtgctcgaccagatggcggaaagcatggacccgctgcacgcgctc
gcccatctcccggtgccggcacgcaccggcgacgactggatcgccttcgtccgcacggtc
gagaacttgcgctgttcggaatggcccgtcgatctcgaacgcgtccggctgtggtacgag
ccgcatctcgatcgcctccacgaggattccgagacgcgccgcgccgatttgatgcagctc
gaacagatcgcgagcggctatccctcgcgcgagaaattcctgaccgagctcacgctcgat
ccgccggacgcgaccagcgacaaatcgggtccgcccttgcgcgacgaggattatctgatc
ctctccactatccactcggccaaaggccaggagtggaagtccgtgttcgtgctcaacgtc
gtcgacggctgcatgccctccgacctcggcgccggcaccagcgccgagctcgaggaggag
cgccgcctgctctacgtcgcgatgacgcgggccaaggacgatttgcacctcgtcgtgccc
cagcgcttcttcgtccatggccaggccgccaagggcgaccgccacgtctacgcctcgcgc
acccgcttcatcccggagcagctggtctatctgttcgagcgcaccgcctggccgaagtcc
gccgcaggtgcagcccgcaccgcggcgcaggggcccaagatcgacatcggggcgcggatg
cgggggatgtggcggtag
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