Bradyrhizobium sp. 62B: ML401_26940
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Entry
ML401_26940 CDS
T10244
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bray Bradyrhizobium sp. 62B
Pathway
bray00470
D-Amino acid metabolism
bray00550
Peptidoglycan biosynthesis
bray01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bray00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ML401_26940 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ML401_26940 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bray01011
]
ML401_26940 (murD)
Enzymes [BR:
bray01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
ML401_26940 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bray01011
]
Precursor biosynthesis
Amino acid ligase
ML401_26940 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
KARI_N
2-Hacid_dh_C
AdoHcyase_NAD
ADH_zinc_N
UDPG_MGDP_dh_N
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
WIW45064
LinkDB
All DBs
Position
complement(5845706..5847103)
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AA seq
465 aa
AA seq
DB search
MIPVTSFAGKTVAVFGLGGSGLASCHALKAGGAEVIAADDNAENVAKAAQAGFITADLRN
VSWANFAALVLAPGVPLTHPVPHWSVLKAREAGCEVIGDIELFCRERRRHAPDAPFVAIT
GTNGKSTTTALIAHLTKVAGYDTQMGGNIGTAILSLEPPRTGRVHVIEMSSYQIDLTPSL
DPSVGILLNVSEDHIDRHGTIAHYAAVKERLVAGVQGGGTAIVGVDDGFCRDIADRLDRS
GKNVVRISVKNPLASGIHVEHGNIVRTAGGARSEIAALGGIGSLRGLHNAQNAACAAAAA
LAMGIGLDVLQNGLRSFPGLAHRMEQVGRRGNVLFVNDSKGTNADATAHALSSFADIFWI
AGGKPKAGGITGLTGYFPRIRKAYLIGEAAQEFSGTLGSVAHEISQTLDVAVEHAARDAE
ASGLTDAVVLLSPACASFDQYRNFEIRGTKFRELVQALPGVKPVV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatccccgtcacctcctttgccggcaagaccgtcgcggtgttcggcctcggcggctcc
gggctcgcctcctgccacgcgctaaaggccggcggcgccgaggtgatcgcggccgacgac
aacgccgagaacgtcgccaaggctgcgcaggccggcttcatcaccgcggatttgcgcaac
gtgtcctgggcgaactttgcggcgctcgtgctcgcgcccggcgtgccgctgacccatccg
gtcccgcattggagcgtgctgaaggcgcgcgaggcgggctgtgaggtgatcggcgacatc
gagctgttctgccgcgagcggcggcgccatgcgccggatgcgccgttcgtcgccatcacc
gggaccaacggcaagtcgaccacgacggcgctgatcgcgcacctcacgaaggttgccggc
tacgacacccagatgggcggcaatatcggcaccgcgatcctgtcgctggagccgccgcgc
acgggccgcgtccacgtcatcgagatgtcgtcctaccagatcgacctcacgccctcgcta
gatccctccgtcggcattttgctcaatgtcagcgaagaccatatcgatcgtcacggcacc
atcgcgcactacgccgcggtgaaggagcgcctcgttgcgggcgtgcaaggaggcggcacc
gcgatcgtcggcgttgacgacggcttttgccgcgacatcgccgaccggctcgaccgctcg
ggcaagaatgtggtgcgcatctccgtcaagaacccgctggcgtcgggcatccatgtcgag
cacggcaatatcgtgcgcaccgcgggcggtgcgcgcagcgagatcgccgcgctcggcggc
atcggctcactccgcggcttgcacaacgcgcagaacgcggcctgcgcggccgcagccgcg
ctcgcgatgggcatcggcctcgacgtgcttcagaatggcctgcgcagctttccgggcctc
gcccaccgcatggagcaggtcggccgccgcggcaacgtgctgttcgtcaacgattccaag
ggcaccaatgcggacgccaccgcgcatgcgctgtcgtcctttgccgacatcttctggatc
gccggcggcaagcccaaggcgggcggtatcactggtctcaccggttatttcccacgcatc
cgcaaggcctatctgatcggcgaggccgcgcaggaattttccggcacgcttggtagtgtc
gcgcacgagatcagccagacgctggacgtcgccgtcgagcacgccgcgcgcgatgcggag
gcatcaggcctcaccgatgccgtcgtgctgctgtcgccagcctgtgcgtccttcgaccag
tatcgcaacttcgagatccgcggcaccaagttccgcgagctggtgcaggcgctgccgggc
gtgaagccggtggtgtag
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