Bradyrhizobium sp. 62B: ML401_30310
Help
Entry
ML401_30310 CDS
T10244
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bray Bradyrhizobium sp. 62B
Pathway
bray03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bray00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ML401_30310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bray03019
]
ML401_30310
Enzymes [BR:
bray01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ML401_30310
Messenger RNA biogenesis [BR:
bray03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ML401_30310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
SUa-2TM
DUF8086
HEM4
Motif
Other DBs
NCBI-ProteinID:
WIW45697
LinkDB
All DBs
Position
6551263..6552825
Genome browser
AA seq
520 aa
AA seq
DB search
MERTHLLTSFQDFGLAEPIARALAEENYVTPTPIQAQTVPIALTGRDVVGIAQTGTGKTA
SFALPILHRLLENRIKPQPKTCRVLVLSPTRELSGQILDSFNAYGRHLRLASTLAIGGVP
MGRQVRALMQGVDVLVATPGRLLDLVQSNGLKLSSVEFLVLDEADRMLDMGFINDIRKIV
AKLPIKRQTLFFSATMPKDIAELADAMLRDPARVAVTPVSSTAERINQRIVQVDFSAKPA
FLTKLLKDEPVNRALVFTRTKHGADKVVKSLEKAGIPASAIHGNKSQNHRERTLAQFRSG
EIRTLVATDIAARGIDVDGISHVINFDLPNVPETYVHRIGRTARAGAEGTAISLVAGGEE
LSYLRDIERLIKVALPREDLRTDAGRRDAGPPPSQQRQGRPGGRPGQRPQGARHGDGRRG
DERHADGRHHSAGRPGEGRPGEGRYGEGRPVDGRPGEGHKASKGSRRRRGSGGKMNSSPA
DRSEQRPAHSAGKPDGIQGVAFLRRESRPNGRPNRNPHSN
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaacccatcttttgacttcgtttcaggatttcggcctcgccgaaccgatcgcg
cgtgctctcgccgaagagaactacgtcactcccacccccatccaggcccagactgttccg
atcgcgctgaccgggcgcgacgtcgtcggcattgcccagaccggaaccggcaagaccgcg
tccttcgcgctgccgatcctgcaccgcctgctcgagaaccgcatcaagccgcagcccaag
acctgccgcgtcctggtgctgtcgcccacccgcgagctgtccggccagatcctcgatagc
ttcaacgcctatggccgccacctccgcctggcctcgacgctcgccatcggcggcgtgccg
atgggccgccaggtccgtgccctgatgcagggcgtcgacgtgctggtcgccacccccggc
cgcctgctcgacctcgtgcaaagcaacggattgaaactttcgagcgtcgaattcctcgtg
ctcgacgaagccgaccgcatgctcgacatgggcttcatcaacgacatccgcaaaatcgtc
gcgaaactcccgatcaagcggcagacgctgttcttctcggccaccatgccgaaggacatc
gccgagctcgccgacgccatgctgcgtgaccccgcccgcgtcgcggtgaccccggtctcc
tcgaccgccgagcggatcaaccagcgcatcgtccaggtcgacttctccgccaagcccgcc
ttcctgaccaagctgctgaaagacgagccggtcaaccgcgcactggtcttcacccgcacc
aagcacggtgccgacaaggtggtgaagtcgctcgagaaggccggcattcccgccagcgcc
atccacggcaacaagtcgcagaaccatcgcgagcgcacgctcgcccagttccgctcgggc
gagatccgcaccctggtcgccaccgacattgccgcccgtggcatcgatgtcgacggcatc
agccacgtcatcaatttcgacctgcccaacgtgccggaaacctatgtccaccgtatcggc
cgcacggcgcgcgccggcgccgagggcaccgcgatctcgctggtggccggcggcgaggaa
ctcagctacctccgcgacatcgagcggctgatcaaggtggcgctgccccgcgaagacctc
cgtaccgatgccggccgccgggacgccggtcctcccccgtcccagcaacggcagggccgg
ccgggtggccgcccgggccagcgtccgcaaggcgcccggcacggcgacggacggcgtggc
gacgaacggcatgccgacggacgccatcatagcgccggcaggcccggcgaaggacggccc
ggcgaaggacgttatggcgagggcagacctgttgatggcaggcccggagagggccacaag
gcctccaaagggtctcgccgccgccgcggttcgggtggtaagatgaattcctcaccagcc
gatcggtcggaacagcgtcccgcgcatagcgccggcaagcctgatggaatacaaggcgtt
gcctttttgcgtcgcgagagtcgccccaacggccgaccgaaccgcaatcctcattcgaac
taa
DBGET
integrated database retrieval system
