Bradyrhizobium sp. 62B: ML401_30535
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Entry
ML401_30535 CDS
T10244
Symbol
pimA
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bray Bradyrhizobium sp. 62B
Pathway
bray00061
Fatty acid biosynthesis
bray00071
Fatty acid degradation
bray01100
Metabolic pathways
bray01212
Fatty acid metabolism
bray02024
Quorum sensing
bray04146
Peroxisome
Module
bray_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bray00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ML401_30535 (pimA)
00071 Fatty acid degradation
ML401_30535 (pimA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ML401_30535 (pimA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
ML401_30535 (pimA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bray01004
]
ML401_30535 (pimA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bray04147
]
ML401_30535 (pimA)
Enzymes [BR:
bray01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ML401_30535 (pimA)
Lipid biosynthesis proteins [BR:
bray01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ML401_30535 (pimA)
Exosome [BR:
bray04147
]
Exosomal proteins
Exosomal proteins of breast milk
ML401_30535 (pimA)
Exosomal proteins of breast cancer cells
ML401_30535 (pimA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WIW45738
LinkDB
All DBs
Position
complement(6597701..6599383)
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AA seq
560 aa
AA seq
DB search
MTHPGEQFYPEGVRWDDTIVQGTLPDLLSKAAADYGPRTALEFRDRPITYTELAAMAERA
AAAYLRAGCGKGTSIALFLGNSPDHPVNFFGALKAGARVAHLSPLDGEIALTHKVSDSGS
RLLVTSNLQALLPTALKFLDKGLIDRLVVCEDDHWGKVGTPQAAIPDDPRIVTFKAFVEG
AATPAQWPSVTADDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPNRAARGEVI
ERVICVLPLFHIYALTVVLLSSLSRGNLISLHQRFDVEAVMRDIEVKRATYFPGVPTMWI
AIAALPDLDRRDFSSLATIGSGGAPLPVEIASFFERKVGKKLKSGWGMTETCSPGTGHPP
TGPEKPGSIGLMLPGIELDVVALDDPRRVLPPGEVGEIRIKGPNVTKGYWNKPEGSTDAF
VDGRFLTGDIGYVDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYTIPGVHEVIVLGIP
DQYRGEAAKAFIKLKPDAKPFSLDELRTQVAGKLGKHELPAAVEFVDDLPRTPVGKLSRH
ELRQQQKPSQSVQHASGGRS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgacccatcccggcgaacagttttatcccgagggcgtgcgttgggacgacaccatcgtc
cagggcacgttgcccgacctgttgtcgaaggcagctgccgactacggcccgcgcaccgcg
ctggaatttcgagaccgtccgatcacctataccgagctcgccgcgatggccgagcgcgcc
gccgcggcatacctccgcgccggctgcggcaagggtacgtcgatcgcgctgtttctcggc
aattcgcctgaccaccccgtcaacttcttcggcgcgctgaaggcgggcgctcgcgttgcg
catctgtcgccgctcgacggcgagatcgcgctgacccacaaggtctcggattccggctcg
cgcctgctcgtcacctcgaacctccaggccttgttgccgaccgcgctgaaattcctggac
aagggactgatcgatcgcctcgtcgtctgcgaggacgatcattggggcaaggtcggcacg
ccgcaggcggcgatccccgatgatccccgcatcgtcaccttcaaggccttcgtcgagggc
gcggctacccctgcgcaatggccgtccgtgacggccgacgatgtcgcgctgctgcaatat
accggcggcaccaccggcctgcccaagggcgcgatgctgacccacggcaatctcacctcg
gccgtgtcgatctacgatgtctggggcaagccgaaccgcgccgcgcgcggcgaggtgatc
gagcgcgtgatctgcgtgctgccgctgtttcatatctatgcgctcaccgtcgtgctgttg
tcctcgctcagccgcggcaatctgatctcgctgcatcagcgcttcgacgtcgaagccgtg
atgcgcgacatcgaggtcaagcgcgcgacttactttccgggcgtgccgacgatgtggatc
gcgatcgccgcgctccccgatctcgacaggcgcgacttctcctcgctcgccaccatcggc
tccggcggcgcgccgctgccggtggagatcgcgagcttcttcgagcgcaaggtcggcaag
aagctgaagagcggctggggcatgaccgagacctgctcgcccggcaccggtcatccgccc
acgggcccggagaagcccggttcgatcggcctgatgctgccgggcatcgagctcgacgtc
gttgccctggacgatcccaggcgcgtgctgccgccgggcgaggtcggcgagatccgcatc
aagggcccgaacgtcaccaagggctactggaacaagccggagggatctaccgacgccttc
gtcgacggccgcttcctcaccggcgacatcggctatgtcgacaccgacggctatttcttc
ctggtcgatcgcaagaaggacatgatcatctccggcggcttcaacgtctatccgcagatg
atcgagcaggcgatctacaccatcccgggcgtgcacgaagtgatcgtgctcggcattccc
gaccaatatcggggcgaagccgccaaagccttcatcaagctgaagccggacgcaaagccg
ttctcgctcgacgagctgcgcacccaggtcgccggcaagctcggcaagcatgaattgccg
gccgccgtcgaattcgtcgacgatttgccgcgcacgccggtcggaaaattgtcgcgccac
gaattgcgccagcagcagaaaccgtcacaatccgttcaacacgcatcaggaggtcgttct
tga
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