Bradyrhizobium sp. 62B: ML401_32210
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Entry
ML401_32210 CDS
T10244
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bray Bradyrhizobium sp. 62B
Pathway
bray03030
DNA replication
bray03410
Base excision repair
bray03420
Nucleotide excision repair
bray03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bray00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ML401_32210 (polA)
03410 Base excision repair
ML401_32210 (polA)
03420 Nucleotide excision repair
ML401_32210 (polA)
03440 Homologous recombination
ML401_32210 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bray03032
]
ML401_32210 (polA)
03400 DNA repair and recombination proteins [BR:
bray03400
]
ML401_32210 (polA)
Enzymes [BR:
bray01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ML401_32210 (polA)
DNA replication proteins [BR:
bray03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ML401_32210 (polA)
DNA repair and recombination proteins [BR:
bray03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ML401_32210 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ML401_32210 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WIW46051
LinkDB
All DBs
Position
6933191..6936271
Genome browser
AA seq
1026 aa
AA seq
DB search
MPKTSPKTPAKADTKSATPKAADKPAAKAAAAPAAAKPVAAKAAGKGDHVFLVDGSSYIF
RAYHALPPLNRKSDGLQVNAVLGFCNMLWKLLRDMPADNRPTHLAIVFDKSEVTFRNAIY
PEYKAHRPPAPDDLIPQFALIREAVRAFDLPCLEQGGFEADDLIATYVREACERGASATI
VSSDKDLMQLVTDCVTMYDTMKDRRIGIPEVIEKFGVPPNKVVEVQALAGDSTDNVPGVP
GIGIKTAAQLITEYGDLDQLLFRAGEIKQPKRREALIENAEKARISRKLVLLDDKVKLDV
PLDDLAVHEPDARKLIAFLKAMEFTTLTRRVADYSQIDPANVDADASNSSSARGGDGAAK
AKPSGDSGDLFSAPAAGPTGGDKGDKSASLKGAPVSLAAAREEAMRKLPVDRSKYQTIKS
PRELSAFIARIHEAGHVAIEIKANSIDPMQADLCGIALALAPNDACYVPLAHKQSGGGAG
LFDAGLAPDQVKHEEAVQALRPVLESAGILKIGFDVKFAAVMLAQHGIILRNTDDAKLIS
YVLDAGRGSQELDSLSERWFGHAMLKENELLGSGKGKITFDQVPIDKAAALSAEGADVAL
RLWRVLKPRLVAEHMTAVYETLERPLVAVLARMERRGISIDRQVLSRLSGDFAQTAARVE
AEIQEIAGEPVNVGSPKQIGDILFGKMGLSGGTKTKTGAWSTTAQVLDELAEQGHDFPKK
ILEWRQVSKLKSTYTDALPTYVNPQTHRVHTTYALAATTTGRLSSNEPNLQNIPVRTEDG
RKIRRAFIATPGHKLVSADYSQIELRLLAEIADIPVLKQAFRDGLDIHAMTASEMFGVPI
KGMPSEIRRRAKAINFGIIYGISAFGLANQLGIAREEASAYIKKYFERFPGIRAYMDETR
DFCRSHGYVTTLFGRKCHYPDIKASNASVRAFNERAAINARLQGTAADIIRRAMTRVEDA
LAAKKLSAQMLLQVHDELIFEVPDAEVEATLPVVQHVMQDAPFPAVLLSVPLHVDARAAN
NWDEAH
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaacctccccgaagacccccgccaaggctgacaccaagtcagccacgccgaaa
gccgccgataagcctgctgccaaggcggccgccgcgccagctgctgccaaaccggttgcg
gcgaaggccgccggcaagggcgaccacgtgttcctggtcgatggttcctcctacatcttc
cgcgcctaccatgcgctgccgccgctgaaccgcaagtccgacgggctgcaggtcaacgcc
gtgctcggcttctgcaacatgctgtggaagctgctgcgtgacatgcccgccgacaaccgg
ccgacgcacctcgctatcgttttcgacaagtccgaggtcactttccgcaacgcgatctac
cccgaatacaaggcacaccggccgccggcgcccgacgatctgatcccgcaattcgcgctg
atccgcgaagcggtgcgcgccttcgacctgccctgcctggagcaaggcggcttcgaggcc
gacgacctcatcgcgacctatgtgcgcgaggcctgcgagcgcggcgccagcgcgaccatc
gtgtcctccgacaaggatttgatgcagctcgtgaccgattgcgtcacgatgtacgacacc
atgaaggaccgccgcatcggcatccccgaggtgatcgagaagttcggcgtgccgccgaac
aaggtcgtcgaggtccaggccctggccggcgattccaccgacaacgtgcccggcgtgcct
ggcatcggcatcaagaccgcggcgcaactgatcaccgaatatggcgacctcgaccaattg
ctgttccgtgccggcgagatcaagcagccgaagcggcgcgaggcgctgatcgagaacgcg
gagaaggcgcggatctcgcgcaagctcgtgctgctcgacgacaaggtgaagctggacgtg
ccgctcgacgacctcgccgtccacgagcccgacgcgcgcaagctgatcgccttcctcaag
gcgatggagttcaccacgctgacgcgccgcgtcgccgactattcgcagatcgatcccgcc
aatgtcgacgccgatgcgagcaacagcagcagcgcccggggcggcgatggcgcggcgaaa
gcaaagccatcaggggattccggcgatctcttctcggcccctgcggcgggcccgacgggc
ggcgacaagggcgacaaatcggcgagcctgaagggcgcgccggtctcgctggctgccgcg
cgtgaagaggccatgcgcaagctgccggtcgaccgcagcaaatatcagacgatcaagtcg
ccgagggagctcagcgccttcatcgcgcgcattcatgaagccggccatgtcgcgatcgag
atcaaggccaactccatcgatccgatgcaggccgatctctgcggcatcgcgctggcgctg
gcgccgaacgatgcctgctacgtaccgctggcgcacaagcagtccggcggcggtgccggc
ctgttcgacgccggtctcgcgcctgaccaggtcaagcacgaagaagcggttcaagcgctg
cggccggtgttggaatcggcaggcattctcaagatcggcttcgacgtcaaattcgccgcc
gtgatgctcgcgcagcacggcatcattttgcgcaacaccgacgacgccaagctgatctct
tacgtgctcgatgccggccggggctcgcaggaactggactcgctgtccgagcgctggttc
ggccacgccatgctgaaggaaaacgagctgctcggcagcggcaagggcaagatcaccttc
gaccaggtgccgatcgacaaggccgcggcgctgtcggccgagggcgccgacgtcgccttg
cggctctggcgcgtgctgaagccgcgcctcgtcgccgagcacatgaccgcggtctacgag
accctggagcggccactggtcgcggtgcttgcgcgcatggagcggcgcggcatctcgatc
gaccgccaggtgctgtcgcgtctgtcaggcgatttcgcccagaccgcagcgcgggtcgag
gccgagatccaggagatcgcgggcgagccggtcaatgtcggcagccccaagcagatcggc
gacatcctgttcggcaagatgggactgtcaggcggcaccaagaccaagaccggcgcatgg
tcgaccaccgcgcaagtgctggatgagctcgccgagcagggccacgacttcccgaagaag
atcctggagtggcgccaggtctcgaaactgaaatcgacctacaccgacgcgctgccaacc
tatgtcaacccgcagacccatcgcgtgcacacgacctacgcgctggccgcgaccacaacg
ggccggctgtcgtcgaacgagccgaacctgcagaacatccccgtgcgtaccgaggacggc
cggaaaatccgccgcgccttcatcgccacgcccgggcacaagctggtctccgccgactat
tcgcagatagagctgcggttgctcgccgagatcgccgacattcccgtgctgaagcaggcg
ttccgcgacggcctcgacattcacgcgatgacggcgtcggaaatgttcggcgtgccgatc
aagggcatgccgagcgaaatccgccgccgcgccaaggcgatcaatttcggcatcatctac
ggcatctcggccttcggcctcgccaaccagctcggcatcgcgcgcgaggaagcctcggcc
tacatcaagaagtatttcgagcgcttccccggcatccgcgcctacatggacgagacgcgg
gacttctgccgcagccacggctatgtcaccacgctgttcggccgcaaatgccactatcct
gatatcaaggcctcaaacgcctcggtgcgcgccttcaacgagcgtgccgcgatcaacgcc
cgccttcagggcaccgccgccgacatcatccgccgcgccatgacgcgggtcgaggacgcg
ctggccgccaagaagctgtcggcgcagatgctgctgcaggtgcacgacgaactgatcttc
gaggtgccggacgccgaggtcgaggcgacgctgcccgtcgtgcagcacgtgatgcaggac
gcgccgttcccggctgtgctgctctcggtgccgctgcatgtggatgcgcgcgcggcgaac
aactgggacgaggcgcattag
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