KEGG   Bradyrhizobium sp. 62B: ML401_34375
Entry
ML401_34375       CDS       T10244                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
bray  Bradyrhizobium sp. 62B
Pathway
bray02020  Two-component system
bray02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bray00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ML401_34375 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ML401_34375 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bray03021]
    ML401_34375 (rpoN)
Transcription machinery [BR:bray03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ML401_34375 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR Arg_repressor
Other DBs
NCBI-ProteinID: WIW46459
LinkDB
Position
complement(125376..126998)
AA seq 540 aa
MALTQRLEFRQSQSLVMTPQLMQAIKLLQLSNLDLTTFVEEELERNPLLERANDEAPAGE
TPTDAGQFSDNDDFGGGNADEPGGGPGEAFEPGQEEWMSKDLGTRAEIEQTLDTGLDNVF
SEEPAEAAARNAQDAAPTTYTEWGGGASGDEDYNLEAFVAAEMTLGDHLAEQLSVAFTAP
AQRMIGQYLIDLVDEAGYLPPDLGQAAERLGASQADVEGVLAVLQKFDPPGVCARNLSEC
LAIQLRELDRYDPAMQALVEHLDLLAKRDIAALRKLCGVDDEDIADMIGEIRRLNPKPGM
KFGSARLQTMVPDVYVRPGPDGGWHVELNSDTLPRVLVNQTYYSQLSKKIGKDGDKSYFT
DALQNATWLVRALDQRARTILKVATEIVRQQDGFFTHGVAHLRPLNLKAVADAIQMHEST
VSRVTANKYMATNRGTFELKYFFTASIASADGGEAHSAEAVRHHIKQLIDSEEPSAILSD
DTIVERLRASGIDIARRTVAKYREAMRIPSSVQRRRDKQSALGNVLSTALSDRSRNPEPA
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggcgctcacgcagagattagagttccggcagtcgcagtcgctggtcatgacgccgcag
ctgatgcaggcgatcaagctgctgcaattgtccaatctcgatctcacgaccttcgtggaa
gaggaactcgagcggaatcccctgctggaacgggccaatgacgaggcccccgcgggtgag
acccccacggatgcgggccagttcagcgacaacgacgatttcggcggcggcaacgcggac
gagcccggcggcggtccgggcgaggcgttcgagccgggccaggaagagtggatgagcaag
gatctcggcacccgcgccgagatcgagcagaccctggacacgggcctggacaacgtcttc
tccgaggagccggccgaggccgcggcacgcaacgcccaggacgccgcgccgaccacctac
accgaatggggcggcggcgcctccggtgacgaggactacaatctcgaagctttcgtcgcg
gccgagatgacactcggcgaccacctcgccgaacagctctcggtggctttcaccgcgccc
gcgcagcgcatgatcggccaatacctgatcgacctcgtcgacgaggctggctatctgccg
cccgatctcggccaggccgcggagcgcctcggcgcatcgcaagccgacgtcgagggcgtc
cttgccgtgctgcaaaagttcgatccgcccggcgtctgtgcgcgcaatttgagcgaatgc
ctggcgatccaactccgcgagctcgaccgctacgaccccgcgatgcaggccctggtcgag
catctcgacctcctcgccaaacgcgacatcgccgccttgcgcaagctctgcggcgtcgac
gacgaggacatcgccgacatgatcggcgagatccgccgcctcaatcccaagcccggcatg
aagttcggttcggcgcgcctgcagaccatggtgcccgacgtctatgtccgcccgggtccc
gacggcggctggcatgtcgagctcaacagcgacaccttgccgcgcgtgctggtcaaccag
acctactattcgcagctgtcgaagaagatcggcaaggacggcgacaagtcctatttcacc
gacgcgctgcagaacgcgacctggctggtgcgcgcgctcgaccagcgcgcccgcaccatc
ctgaaagtagcaaccgagatcgtgcgccagcaggacggcttcttcacccatggcgtggcg
catctgcggccgctgaatctgaaggccgtcgccgacgccatccagatgcatgaatccacg
gtgtcccgcgtcaccgccaacaaatacatggcgaccaaccgcggcacgttcgagctgaaa
tatttcttcacggcctcgatcgcctcggccgacggcggcgaggcgcattccgccgaagcg
gtgcgccatcacatcaagcagctgatcgattcggaggagccgagcgcgatcctgtcggac
gacaccatcgtggaacgcttgcgcgcttcgggcattgatattgcccgccgcacggtcgcg
aagtaccgcgaagccatgcgcattccttcctcggtgcaacgccgccgcgacaagcagagc
gcccttggtaacgtcctctccaccgccttgtccgatcgctcgcgcaatcccgaaccggcc
tga

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