Bradyrhizobium sp. 62B: ML401_34375
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Entry
ML401_34375 CDS
T10244
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bray Bradyrhizobium sp. 62B
Pathway
bray02020
Two-component system
bray02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bray00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ML401_34375 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ML401_34375 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bray03021
]
ML401_34375 (rpoN)
Transcription machinery [BR:
bray03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ML401_34375 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
WIW46459
LinkDB
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Position
complement(125376..126998)
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AA seq
540 aa
AA seq
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MALTQRLEFRQSQSLVMTPQLMQAIKLLQLSNLDLTTFVEEELERNPLLERANDEAPAGE
TPTDAGQFSDNDDFGGGNADEPGGGPGEAFEPGQEEWMSKDLGTRAEIEQTLDTGLDNVF
SEEPAEAAARNAQDAAPTTYTEWGGGASGDEDYNLEAFVAAEMTLGDHLAEQLSVAFTAP
AQRMIGQYLIDLVDEAGYLPPDLGQAAERLGASQADVEGVLAVLQKFDPPGVCARNLSEC
LAIQLRELDRYDPAMQALVEHLDLLAKRDIAALRKLCGVDDEDIADMIGEIRRLNPKPGM
KFGSARLQTMVPDVYVRPGPDGGWHVELNSDTLPRVLVNQTYYSQLSKKIGKDGDKSYFT
DALQNATWLVRALDQRARTILKVATEIVRQQDGFFTHGVAHLRPLNLKAVADAIQMHEST
VSRVTANKYMATNRGTFELKYFFTASIASADGGEAHSAEAVRHHIKQLIDSEEPSAILSD
DTIVERLRASGIDIARRTVAKYREAMRIPSSVQRRRDKQSALGNVLSTALSDRSRNPEPA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcacgcagagattagagttccggcagtcgcagtcgctggtcatgacgccgcag
ctgatgcaggcgatcaagctgctgcaattgtccaatctcgatctcacgaccttcgtggaa
gaggaactcgagcggaatcccctgctggaacgggccaatgacgaggcccccgcgggtgag
acccccacggatgcgggccagttcagcgacaacgacgatttcggcggcggcaacgcggac
gagcccggcggcggtccgggcgaggcgttcgagccgggccaggaagagtggatgagcaag
gatctcggcacccgcgccgagatcgagcagaccctggacacgggcctggacaacgtcttc
tccgaggagccggccgaggccgcggcacgcaacgcccaggacgccgcgccgaccacctac
accgaatggggcggcggcgcctccggtgacgaggactacaatctcgaagctttcgtcgcg
gccgagatgacactcggcgaccacctcgccgaacagctctcggtggctttcaccgcgccc
gcgcagcgcatgatcggccaatacctgatcgacctcgtcgacgaggctggctatctgccg
cccgatctcggccaggccgcggagcgcctcggcgcatcgcaagccgacgtcgagggcgtc
cttgccgtgctgcaaaagttcgatccgcccggcgtctgtgcgcgcaatttgagcgaatgc
ctggcgatccaactccgcgagctcgaccgctacgaccccgcgatgcaggccctggtcgag
catctcgacctcctcgccaaacgcgacatcgccgccttgcgcaagctctgcggcgtcgac
gacgaggacatcgccgacatgatcggcgagatccgccgcctcaatcccaagcccggcatg
aagttcggttcggcgcgcctgcagaccatggtgcccgacgtctatgtccgcccgggtccc
gacggcggctggcatgtcgagctcaacagcgacaccttgccgcgcgtgctggtcaaccag
acctactattcgcagctgtcgaagaagatcggcaaggacggcgacaagtcctatttcacc
gacgcgctgcagaacgcgacctggctggtgcgcgcgctcgaccagcgcgcccgcaccatc
ctgaaagtagcaaccgagatcgtgcgccagcaggacggcttcttcacccatggcgtggcg
catctgcggccgctgaatctgaaggccgtcgccgacgccatccagatgcatgaatccacg
gtgtcccgcgtcaccgccaacaaatacatggcgaccaaccgcggcacgttcgagctgaaa
tatttcttcacggcctcgatcgcctcggccgacggcggcgaggcgcattccgccgaagcg
gtgcgccatcacatcaagcagctgatcgattcggaggagccgagcgcgatcctgtcggac
gacaccatcgtggaacgcttgcgcgcttcgggcattgatattgcccgccgcacggtcgcg
aagtaccgcgaagccatgcgcattccttcctcggtgcaacgccgccgcgacaagcagagc
gcccttggtaacgtcctctccaccgccttgtccgatcgctcgcgcaatcccgaaccggcc
tga
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